U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

zbtb33 zinc finger and BTB domain containing 33 [ Austrofundulus limnaeus ]

Gene ID: 106514655, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
zbtb33
Gene description
zinc finger and BTB domain containing 33
Gene type
protein coding
RefSeq status
MODEL
Organism
Austrofundulus limnaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Austrofundulus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See zbtb33 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Austrofundulus_limnaeus-1.0 (GCF_001266775.1) Unplaced Scaffold NW_013952403.1 (1705164..1708156)

NW_013952403.1Genomic Context describing neighboring genes Neighboring gene UPF3B regulator of nonsense mediated mRNA decay Neighboring gene NADH:ubiquinone oxidoreductase subunit A1 Neighboring gene NFKB activating protein Neighboring gene transmembrane protein 255A Neighboring gene ATPase Na+/K+ transporting subunit beta 4

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_013952403.1 Unplaced Scaffold Reference Austrofundulus_limnaeus-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transcriptional regulator Kaiso

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Austrofundulus limnaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Austrofundulus_limnaeus-1.0

Genomic

  1. NW_013952403.1 Reference Austrofundulus_limnaeus-1.0

    Range
    1705164..1708156
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014004052.1 → XP_013859506.1  transcriptional regulator Kaiso

    UniProtKB/TrEMBL
    A0A2I4AVJ2
    Conserved Domains (5) summary
    smart00225
    Location:33 → 116
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:422 → 442
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:22 → 116
    BTB; BTB/POZ domain
    pfam13465
    Location:434 → 458
    zf-H2C2_2; Zinc-finger double domain
    pfam13894
    Location:420 → 442
    zf-C2H2_4; C2H2-type zinc finger
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.