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LRRC45 leucine rich repeat containing 45 [ Anser cygnoides (Swan goose) ]

Gene ID: 106046782, updated on 5-Aug-2024

Summary

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Gene symbol
LRRC45
Gene description
leucine rich repeat containing 45
See related
EnsemblRapid:ENSACDG00000007420
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 19 NC_089891.1 (12950414..12963019)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927890.1 (187324..199595, complement)

Chromosome 19 - NC_089891.1Genomic Context describing neighboring genes Neighboring gene ASPSCR1 tether for SLC2A4, UBX domain containing Neighboring gene centromere protein X Neighboring gene Rac family small GTPase 3 Neighboring gene dicarbonyl and L-xylulose reductase Neighboring gene RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat-containing protein 45

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089891.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    12950414..12963019
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066980395.1 → XP_066836496.1  leucine-rich repeat-containing protein 45 isoform X2

  2. XM_066980396.1 → XP_066836497.1  leucine-rich repeat-containing protein 45 isoform X3

  3. XM_066980394.1 → XP_066836495.1  leucine-rich repeat-containing protein 45 isoform X1

  4. XM_013197958.3 → XP_013053412.1  leucine-rich repeat-containing protein 45 isoform X4

    Related
    ENSACDP00000013016.1
    Conserved Domains (3) summary
    cd00116
    Location:4 → 159
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:18 → 45
    LRR_RI; leucine-rich repeat [structural motif]
    pfam01496
    Location:430 → 534
    V_ATPase_I; V-type ATPase 116kDa subunit family

  5. XM_013197961.3 → XP_013053415.1  leucine-rich repeat-containing protein 45 isoform X5

    See identical proteins and their annotated locations for XP_013053415.1

    Conserved Domains (3) summary
    cd00116
    Location:2 → 129
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:16 → 42
    LRR_RI; leucine-rich repeat [structural motif]
    pfam01496
    Location:400 → 504
    V_ATPase_I; V-type ATPase 116kDa subunit family
Nucleotide Protein
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