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SOD1 superoxide dismutase 1 [ Anser cygnoides (Swan goose) ]

Gene ID: 106043455, updated on 13-Mar-2024

Summary

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Gene symbol
SOD1
Gene description
superoxide dismutase 1
See related
EnsemblRapid:ENSACDG00000015323
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927718.1 (4860666..4866455, complement)

NW_025927718.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125183664 Neighboring gene SR-related CTD associated factor 4 Neighboring gene TIAM Rac1 associated GEF 1 Neighboring gene uncharacterized LOC125183670 Neighboring gene claudin-8-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025927718 Unplaced Scaffold Reference GooseV1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables superoxide dismutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in removal of superoxide radicals IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
superoxide dismutase [Cu-Zn]
Names
superoxide dismutase 1, soluble

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anser cygnoides Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GooseV1.0 Primary Assembly

Genomic

  1. NW_025927718.1 Reference GooseV1.0 Primary Assembly

    Range
    4860666..4866455 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048071453.1 → XP_047927410.1  superoxide dismutase [Cu-Zn] isoform X2

    UniProtKB/TrEMBL
    A0A8B9DTE4

  2. XM_013192917.2 → XP_013048371.2  superoxide dismutase [Cu-Zn] isoform X1

    UniProtKB/TrEMBL
    A0A8B9DTE4
Nucleotide Protein
Heading Accession and Version

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