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Epcam epithelial cell adhesion molecule [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105986869, updated on 13-Mar-2024

Summary

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Gene symbol
Epcam
Gene description
epithelial cell adhesion molecule
See related
Ensembl:ENSDORG00000006849
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267253.1 (7786059..7822187)

NW_012267253.1Genomic Context describing neighboring genes Neighboring gene sperm-tail PG-rich repeat containing 4 Neighboring gene calmodulin 2 Neighboring gene mutS homolog 2 Neighboring gene potassium two pore domain channel subfamily K member 12

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267253.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadherin binding involved in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
epithelial cell adhesion molecule

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267253.1 Reference Dord_2.0

    Range
    7786059..7822187
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013017985.1 → XP_012873439.1  epithelial cell adhesion molecule

    UniProtKB/TrEMBL
    A0A1S3FBN8
    Related
    ENSDORP00000006415.2, ENSDORT00000006848.2
    Conserved Domains (1) summary
    cd00191
    Location:65 → 125
    TY; Thyroglobulin type I repeats.; The N-terminal region of human thyroglobulin contains 11 type-1 repeats TY repeats are proposed to be inhibitors of cysteine proteases
Nucleotide Protein
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