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Snapc1 small nuclear RNA activating complex polypeptide 1 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105984087, updated on 13-Mar-2024

Summary

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Gene symbol
Snapc1
Gene description
small nuclear RNA activating complex polypeptide 1
See related
Ensembl:ENSDORG00000013434
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267218.1 (33304325..33324905, complement)

NW_012267218.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105984707 Neighboring gene synaptotagmin 16 Neighboring gene hypoxia inducible factor 1 subunit alpha Neighboring gene serine/Arginine-related protein 53

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267218.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in snRNA transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in snRNA transcription by RNA polymerase III IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of snRNA-activating protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
snRNA-activating protein complex subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267218.1 Reference Dord_2.0

    Range
    33304325..33324905 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013014167.1 → XP_012869621.1  snRNA-activating protein complex subunit 1

    UniProtKB/TrEMBL
    A0A1S3EYX4
    Related
    ENSDORP00000012632.2, ENSDORT00000013434.2
    Conserved Domains (1) summary
    pfam09808
    Location:7 → 191
    SNAPc_SNAP43; Small nuclear RNA activating complex (SNAPc), subunit SNAP43
Nucleotide Protein
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