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tns1b tensin 1b [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105938933, updated on 20-Aug-2024

Summary

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Gene symbol
tns1b
Gene description
tensin 1b
See related
EnsemblRapid:ENSFHEG00000013237
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Also known as
tns1; Tensin-1
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 7
Exon count:
40
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 7 NC_046367.1 (43016787..43208944)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012234524.1 (697802..886528, complement)

Chromosome 7 - NC_046367.1Genomic Context describing neighboring genes Neighboring gene sterol 26-hydroxylase, mitochondrial-like Neighboring gene sterol 26-hydroxylase, mitochondrial Neighboring gene tensin-2-like Neighboring gene sterol 26-hydroxylase, mitochondrial-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fibroblast migration IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tensin-1
Names
tensin 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046367.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    43016787..43208944
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036139696.1 → XP_035995589.1  tensin-1 isoform X7

    UniProtKB/TrEMBL
    A0A3Q2QMV3
    Conserved Domains (7) summary
    cd09927
    Location:1551 → 1665
    SH2_Tensin_like; Src homology 2 domain found in Tensin-like proteins
    PHA03247
    Location:1007 → 1465
    PHA03247; large tegument protein UL36; Provisional
    PRK10856
    Location:812 → 953
    PRK10856; cytoskeleton protein RodZ
    cd01213
    Location:1697 → 1826
    PTB_tensin; Tensin Phosphotyrosine-binding (PTB) domain
    pfam10409
    Location:312 → 438
    PTEN_C2; C2 domain of PTEN tumor-suppressor protein
    cd20888
    Location:43 → 98
    C1_TNS1_v; protein kinase C conserved region 1 (C1 domain) found in tensin-1 (TNS1) variant and similar proteins
    cl28904
    Location:147 → 305
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  2. XM_036139691.1 → XP_035995584.1  tensin-1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2QMV3
    Conserved Domains (6) summary
    cd09927
    Location:1572 → 1686
    SH2_Tensin_like; Src homology 2 domain found in Tensin-like proteins
    PHA03247
    Location:835 → 1408
    PHA03247; large tegument protein UL36; Provisional
    cd01213
    Location:1718 → 1847
    PTB_tensin; Tensin Phosphotyrosine-binding (PTB) domain
    pfam10409
    Location:312 → 438
    PTEN_C2; C2 domain of PTEN tumor-suppressor protein
    cd20888
    Location:43 → 98
    C1_TNS1_v; protein kinase C conserved region 1 (C1 domain) found in tensin-1 (TNS1) variant and similar proteins
    cl28904
    Location:147 → 305
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  3. XM_036139694.1 → XP_035995587.1  tensin-1 isoform X5

    UniProtKB/TrEMBL
    A0A3Q2QMV3
    Conserved Domains (6) summary
    cd09927
    Location:1572 → 1686
    SH2_Tensin_like; Src homology 2 domain found in Tensin-like proteins
    PHA03247
    Location:835 → 1408
    PHA03247; large tegument protein UL36; Provisional
    cd01213
    Location:1707 → 1838
    PTB_tensin; Tensin Phosphotyrosine-binding (PTB) domain
    pfam10409
    Location:312 → 438
    PTEN_C2; C2 domain of PTEN tumor-suppressor protein
    cd20888
    Location:43 → 98
    C1_TNS1_v; protein kinase C conserved region 1 (C1 domain) found in tensin-1 (TNS1) variant and similar proteins
    cl28904
    Location:147 → 305
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  4. XM_036139692.1 → XP_035995585.1  tensin-1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2QMV3
    Conserved Domains (6) summary
    cd09927
    Location:1570 → 1684
    SH2_Tensin_like; Src homology 2 domain found in Tensin-like proteins
    PHA03247
    Location:833 → 1406
    PHA03247; large tegument protein UL36; Provisional
    cd01213
    Location:1716 → 1845
    PTB_tensin; Tensin Phosphotyrosine-binding (PTB) domain
    pfam10409
    Location:312 → 438
    PTEN_C2; C2 domain of PTEN tumor-suppressor protein
    cd20888
    Location:43 → 98
    C1_TNS1_v; protein kinase C conserved region 1 (C1 domain) found in tensin-1 (TNS1) variant and similar proteins
    cl28904
    Location:147 → 305
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  5. XM_036139701.1 → XP_035995594.1  tensin-1 isoform X13

    UniProtKB/TrEMBL
    A0A3Q2QMV3
    Conserved Domains (6) summary
    cd09927
    Location:1570 → 1684
    SH2_Tensin_like; Src homology 2 domain found in Tensin-like proteins
    PHA03247
    Location:833 → 1406
    PHA03247; large tegument protein UL36; Provisional
    cd01213
    Location:1705 → 1836
    PTB_tensin; Tensin Phosphotyrosine-binding (PTB) domain
    pfam10409
    Location:312 → 438
    PTEN_C2; C2 domain of PTEN tumor-suppressor protein
    cd20888
    Location:43 → 98
    C1_TNS1_v; protein kinase C conserved region 1 (C1 domain) found in tensin-1 (TNS1) variant and similar proteins
    cl28904
    Location:147 → 305
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  6. XM_021307729.2 → XP_021163404.2  tensin-1 isoform X4

    UniProtKB/TrEMBL
    A0A3Q2QMV3
    Conserved Domains (6) summary
    cd09927
    Location:1563 → 1677
    SH2_Tensin_like; Src homology 2 domain found in Tensin-like proteins
    PHA03247
    Location:1060 → 1509
    PHA03247; large tegument protein UL36; Provisional
    cd01213
    Location:1709 → 1838
    PTB_tensin; Tensin Phosphotyrosine-binding (PTB) domain
    pfam10409
    Location:312 → 438
    PTEN_C2; C2 domain of PTEN tumor-suppressor protein
    cd20888
    Location:43 → 98
    C1_TNS1_v; protein kinase C conserved region 1 (C1 domain) found in tensin-1 (TNS1) variant and similar proteins
    cl28904
    Location:147 → 305
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  7. XM_021307733.2 → XP_021163408.2  tensin-1 isoform X9

    UniProtKB/TrEMBL
    A0A3Q2QMV3
    Related
    ENSFHEP00000028866.2, ENSFHET00000018906.2
    Conserved Domains (7) summary
    cd09927
    Location:1542 → 1656
    SH2_Tensin_like; Src homology 2 domain found in Tensin-like proteins
    PHA03247
    Location:870 → 1257
    PHA03247; large tegument protein UL36; Provisional
    COG5099
    Location:1101 → 1442
    COG5099; RNA-binding protein of the Puf family, translational repressor [Translation, ribosomal structure and biogenesis]
    cd01213
    Location:1688 → 1817
    PTB_tensin; Tensin Phosphotyrosine-binding (PTB) domain
    pfam10409
    Location:312 → 438
    PTEN_C2; C2 domain of PTEN tumor-suppressor protein
    cd20888
    Location:43 → 98
    C1_TNS1_v; protein kinase C conserved region 1 (C1 domain) found in tensin-1 (TNS1) variant and similar proteins
    cl28904
    Location:147 → 305
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  8. XM_036139697.1 → XP_035995590.1  tensin-1 isoform X8

    UniProtKB/TrEMBL
    A0A3Q2QMV3
    Related
    ENSFHEP00000047969.1, ENSFHET00000038455.1
    Conserved Domains (6) summary
    cd09927
    Location:1545 → 1659
    SH2_Tensin_like; Src homology 2 domain found in Tensin-like proteins
    PHA03247
    Location:835 → 1381
    PHA03247; large tegument protein UL36; Provisional
    cd01213
    Location:1691 → 1820
    PTB_tensin; Tensin Phosphotyrosine-binding (PTB) domain
    pfam10409
    Location:312 → 438
    PTEN_C2; C2 domain of PTEN tumor-suppressor protein
    cd20888
    Location:43 → 98
    C1_TNS1_v; protein kinase C conserved region 1 (C1 domain) found in tensin-1 (TNS1) variant and similar proteins
    cl28904
    Location:147 → 305
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  9. XM_036139698.1 → XP_035995591.1  tensin-1 isoform X10

    UniProtKB/TrEMBL
    A0A3Q2T9X1
    Conserved Domains (6) summary
    cd09927
    Location:1540 → 1654
    SH2_Tensin_like; Src homology 2 domain found in Tensin-like proteins
    PHA03247
    Location:803 → 1376
    PHA03247; large tegument protein UL36; Provisional
    cd01213
    Location:1686 → 1815
    PTB_tensin; Tensin Phosphotyrosine-binding (PTB) domain
    pfam10409
    Location:280 → 406
    PTEN_C2; C2 domain of PTEN tumor-suppressor protein
    cd20888
    Location:10 → 66
    C1_TNS1_v; protein kinase C conserved region 1 (C1 domain) found in tensin-1 (TNS1) variant and similar proteins
    cl28904
    Location:115 → 273
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  10. XM_036139693.1 → XP_035995586.1  tensin-1 isoform X3

    UniProtKB/TrEMBL
    A0A3Q2T9X1
    Conserved Domains (6) summary
    cd09927
    Location:1569 → 1683
    SH2_Tensin_like; Src homology 2 domain found in Tensin-like proteins
    PHA03247
    Location:832 → 1405
    PHA03247; large tegument protein UL36; Provisional
    cd01213
    Location:1715 → 1844
    PTB_tensin; Tensin Phosphotyrosine-binding (PTB) domain
    pfam10409
    Location:309 → 435
    PTEN_C2; C2 domain of PTEN tumor-suppressor protein
    cd20888
    Location:39 → 95
    C1_TNS1_v; protein kinase C conserved region 1 (C1 domain) found in tensin-1 (TNS1) variant and similar proteins
    cl28904
    Location:144 → 302
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  11. XM_036139695.1 → XP_035995588.1  tensin-1 isoform X6

    UniProtKB/TrEMBL
    A0A3Q2T9X1
    Related
    ENSFHEP00000011800.2, ENSFHET00000031767.2
    Conserved Domains (6) summary
    cd09927
    Location:1562 → 1676
    SH2_Tensin_like; Src homology 2 domain found in Tensin-like proteins
    PHA03247
    Location:825 → 1398
    PHA03247; large tegument protein UL36; Provisional
    cd01213
    Location:1708 → 1837
    PTB_tensin; Tensin Phosphotyrosine-binding (PTB) domain
    pfam10409
    Location:302 → 428
    PTEN_C2; C2 domain of PTEN tumor-suppressor protein
    cd20888
    Location:32 → 88
    C1_TNS1_v; protein kinase C conserved region 1 (C1 domain) found in tensin-1 (TNS1) variant and similar proteins
    cl28904
    Location:137 → 295
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  12. XM_036139699.1 → XP_035995592.1  tensin-1 isoform X11

    UniProtKB/TrEMBL
    A0A3Q2T9X1
    Related
    ENSFHEP00000011777.2, ENSFHET00000031735.2
    Conserved Domains (5) summary
    cd09927
    Location:1491 → 1605
    SH2_Tensin_like; Src homology 2 domain found in Tensin-like proteins
    PHA03247
    Location:754 → 1327
    PHA03247; large tegument protein UL36; Provisional
    cd01213
    Location:1637 → 1766
    PTB_tensin; Tensin Phosphotyrosine-binding (PTB) domain
    pfam10409
    Location:231 → 357
    PTEN_C2; C2 domain of PTEN tumor-suppressor protein
    cl28904
    Location:66 → 224
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  13. XM_036139700.1 → XP_035995593.1  tensin-1 isoform X12

    UniProtKB/TrEMBL
    A0A146V2N4
    Related
    ENSFHEP00000028861.2, ENSFHET00000018941.2
    Conserved Domains (5) summary
    cd09927
    Location:1485 → 1599
    SH2_Tensin_like; Src homology 2 domain found in Tensin-like proteins
    PHA03247
    Location:748 → 1321
    PHA03247; large tegument protein UL36; Provisional
    cd01213
    Location:1631 → 1760
    PTB_tensin; Tensin Phosphotyrosine-binding (PTB) domain
    pfam10409
    Location:225 → 351
    PTEN_C2; C2 domain of PTEN tumor-suppressor protein
    cl28904
    Location:60 → 218
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
Nucleotide Protein
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