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LOC105937284 multiple PDZ domain protein [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105937284, updated on 20-Aug-2024

Summary

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Gene symbol
LOC105937284
Gene description
multiple PDZ domain protein
See related
EnsemblRapid:ENSFHEG00000003047
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Also known as
mpdz
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 14
Exon count:
51
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 14 NC_046374.1 (19765541..19842495)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012234476.1 (347203..430531, complement)

Chromosome 14 - NC_046374.1Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette, sub-family A (ABC1), member 4a Neighboring gene adhesion G protein-coupled receptor L3 Neighboring gene leucine rich adaptor protein 1-like Neighboring gene uncharacterized LOC118565709 Neighboring gene 5,6-dihydroxyindole-2-carboxylic acid oxidase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
multiple PDZ domain protein
Names
multiple PDZ domain crumbs cell polarity complex component

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046374.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    19765541..19842495
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036146503.1 → XP_036002396.1  multiple PDZ domain protein isoform X2

    UniProtKB/TrEMBL
    A0A146P453
    Conserved Domains (4) summary
    smart00228
    Location:346 → 435
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1158 → 1249
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:6 → 61
    L27_2
    pfam16667
    Location:1652 → 1715
    MPDZ_u10; Unstructured region 10 on multiple PDZ protein

  2. XM_036146502.1 → XP_036002395.1  multiple PDZ domain protein isoform X1

    UniProtKB/TrEMBL
    A0A146P453
    Conserved Domains (5) summary
    PHA02682
    Location:1255 → 1396
    PHA02682; ORF080 virion core protein; Provisional
    smart00228
    Location:346 → 435
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1158 → 1249
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:6 → 61
    L27_2
    pfam16667
    Location:1653 → 1716
    MPDZ_u10; Unstructured region 10 on multiple PDZ protein

  3. XM_036146504.1 → XP_036002397.1  multiple PDZ domain protein isoform X3

    UniProtKB/TrEMBL
    A0A146P453
    Conserved Domains (5) summary
    PHA02682
    Location:1255 → 1371
    PHA02682; ORF080 virion core protein; Provisional
    smart00228
    Location:346 → 435
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1158 → 1249
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:6 → 61
    L27_2
    pfam16667
    Location:1628 → 1691
    MPDZ_u10; Unstructured region 10 on multiple PDZ protein

  4. XM_036146506.1 → XP_036002399.1  multiple PDZ domain protein isoform X5

    UniProtKB/TrEMBL
    A0A146P453
    Conserved Domains (4) summary
    smart00228
    Location:346 → 435
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1158 → 1249
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:6 → 61
    L27_2
    pfam16667
    Location:1621 → 1684
    MPDZ_u10; Unstructured region 10 on multiple PDZ protein

  5. XM_036146509.1 → XP_036002402.1  multiple PDZ domain protein isoform X7

    UniProtKB/TrEMBL
    A0A146P453
    Related
    ENSFHEP00000056813.1, ENSFHET00000040002.1
    Conserved Domains (4) summary
    smart00228
    Location:346 → 435
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1158 → 1249
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:6 → 61
    L27_2
    pfam16667
    Location:1597 → 1660
    MPDZ_u10; Unstructured region 10 on multiple PDZ protein

  6. XM_036146507.1 → XP_036002400.1  multiple PDZ domain protein isoform X6

    UniProtKB/TrEMBL
    A0A146P453
    Conserved Domains (4) summary
    smart00228
    Location:346 → 435
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1158 → 1249
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:6 → 61
    L27_2
    pfam16667
    Location:1598 → 1661
    MPDZ_u10; Unstructured region 10 on multiple PDZ protein

  7. XM_036146505.1 → XP_036002398.1  multiple PDZ domain protein isoform X4

    UniProtKB/TrEMBL
    A0A146P453
    Related
    ENSFHEP00000045036.1, ENSFHET00000059141.1
    Conserved Domains (4) summary
    smart00228
    Location:346 → 435
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1158 → 1249
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:6 → 61
    L27_2
    pfam16667
    Location:1623 → 1686
    MPDZ_u10; Unstructured region 10 on multiple PDZ protein

  8. XM_036146510.1 → XP_036002403.1  multiple PDZ domain protein isoform X8

    UniProtKB/TrEMBL
    A0A146P453
    Related
    ENSFHEP00000039538.1, ENSFHET00000070300.1
    Conserved Domains (5) summary
    smart00228
    Location:346 → 435
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    COG0793
    Location:1193 → 1316
    CtpA; C-terminal processing protease CtpA/Prc, contains a PDZ domain [Posttranslational modification, protein turnover, chaperones]
    cd00992
    Location:1158 → 1249
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:6 → 61
    L27_2
    pfam16667
    Location:1592 → 1655
    MPDZ_u10; Unstructured region 10 on multiple PDZ protein

  9. XM_036146512.1 → XP_036002405.1  multiple PDZ domain protein isoform X10

    UniProtKB/TrEMBL
    A0A146P453
    Related
    ENSFHEP00000051071.1, ENSFHET00000040040.1
    Conserved Domains (4) summary
    smart00228
    Location:346 → 435
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1158 → 1249
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:6 → 61
    L27_2
    pfam16667
    Location:1568 → 1631
    MPDZ_u10; Unstructured region 10 on multiple PDZ protein

  10. XM_036146511.1 → XP_036002404.1  multiple PDZ domain protein isoform X9

    UniProtKB/TrEMBL
    A0A146P453
    Conserved Domains (4) summary
    smart00228
    Location:346 → 435
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1158 → 1249
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:6 → 61
    L27_2
    pfam16667
    Location:1569 → 1632
    MPDZ_u10; Unstructured region 10 on multiple PDZ protein
Nucleotide Protein
Heading Accession and Version

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