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trappc11 trafficking protein particle complex subunit 11 [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105937228, updated on 20-Aug-2024

Summary

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Gene symbol
trappc11
Gene description
trafficking protein particle complex subunit 11
See related
EnsemblRapid:ENSFHEG00000007139
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Orthologs
human zebrafish all
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Genomic context

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See trappc11 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) Unplaced Scaffold NW_023396689.1 (5528897..5544635, complement)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012224489.1 (104506..123146, complement)

NW_023396689.1Genomic Context describing neighboring genes Neighboring gene SIL1 nucleotide exchange factor Neighboring gene spindle apparatus coiled-coil protein 1 Neighboring gene uncharacterized LOC118559414 Neighboring gene uncharacterized LOC118556049

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
trafficking protein particle complex subunit 11
Names
trafficking protein particle complex 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NW_023396689.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    5528897..5544635 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036130127.1 → XP_035986020.1  trafficking protein particle complex subunit 11

    UniProtKB/TrEMBL
    A0A3Q2SYY7
    Conserved Domains (2) summary
    pfam11817
    Location:263 → 520
    Foie-gras_1; Foie gras liver health family 1
    pfam12742
    Location:1035 → 1085
    Gryzun-like; Gryzun, putative Golgi trafficking

  2. XM_036130129.1 → XP_035986022.1  trafficking protein particle complex subunit 11

    UniProtKB/TrEMBL
    A0A3Q2SYY7
    Related
    ENSFHEP00000006018.2, ENSFHET00000006204.2
    Conserved Domains (2) summary
    pfam11817
    Location:263 → 520
    Foie-gras_1; Foie gras liver health family 1
    pfam12742
    Location:1035 → 1085
    Gryzun-like; Gryzun, putative Golgi trafficking

  3. XM_012878431.3 → XP_012733885.2  trafficking protein particle complex subunit 11

    UniProtKB/TrEMBL
    A0A3Q2SYY7
    Related
    ENSFHEP00000006004.2, ENSFHET00000006226.2
    Conserved Domains (2) summary
    pfam11817
    Location:263 → 520
    Foie-gras_1; Foie gras liver health family 1
    pfam12742
    Location:1035 → 1085
    Gryzun-like; Gryzun, putative Golgi trafficking

  4. XM_036130128.1 → XP_035986021.1  trafficking protein particle complex subunit 11

    UniProtKB/TrEMBL
    A0A3Q2SYY7
    Related
    ENSFHEP00000025025.2, ENSFHET00000006266.2
    Conserved Domains (2) summary
    pfam11817
    Location:263 → 520
    Foie-gras_1; Foie gras liver health family 1
    pfam12742
    Location:1035 → 1085
    Gryzun-like; Gryzun, putative Golgi trafficking
Nucleotide Protein
Heading Accession and Version

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