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nop53 NOP53 ribosome biogenesis factor [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105933184, updated on 20-Aug-2024

Summary

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Gene symbol
nop53
Gene description
NOP53 ribosome biogenesis factor
See related
EnsemblRapid:ENSFHEG00000017763
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Also known as
gltscr2
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 18
Exon count:
13
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 18 NC_046378.1 (6017345..6030672, complement)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012234374.1 (94209..107524, complement)

Chromosome 18 - NC_046378.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118566715 Neighboring gene gap junction delta-2 protein Neighboring gene histone H3.3A Neighboring gene histone H3.3A Neighboring gene uncharacterized LOC118566799

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5S rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribosome biogenesis protein NOP53
Names
Glioma tumor suppressor candidate region gene 2 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046378.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    6017345..6030672 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012872608.3 → XP_012728062.3  ribosome biogenesis protein NOP53

    UniProtKB/TrEMBL
    A0A146W2T8
    Related
    ENSFHEP00000031690.2, ENSFHET00000024368.2
    Conserved Domains (1) summary
    pfam07767
    Location:60 → 443
    Nop53; Nop53 (60S ribosomal biogenesis)
Nucleotide Protein
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