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ptgfr prostaglandin F receptor (FP) [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105927833, updated on 24-Aug-2024

Summary

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Gene symbol
ptgfr
Gene description
prostaglandin F receptor (FP)
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 9
Exon count:
3
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 9 NC_046369.1 (24386310..24391190, complement)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012234285.1 (1521017..1524666)

Chromosome 9 - NC_046369.1Genomic Context describing neighboring genes Neighboring gene zinc finger, FYVE domain containing 9b Neighboring gene basic transcription factor 3-like 4 Neighboring gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5b Neighboring gene solute carrier family 44 member 5b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables prostaglandin F receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cytosolic calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prostaglandin F2-alpha receptor
Names
5-hydroxytryptamine receptor 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046369.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    24386310..24391190 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036141302.1 → XP_035997195.1  prostaglandin F2-alpha receptor

    UniProtKB/TrEMBL
    A0A3Q2NPE6
    Conserved Domains (2) summary
    cd14964
    Location:27 → 53
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:26 → 314
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

  2. XM_036141303.1 → XP_035997196.1  prostaglandin F2-alpha receptor

    UniProtKB/TrEMBL
    A0A3Q2NPE6
    Conserved Domains (2) summary
    cd14964
    Location:27 → 53
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:26 → 314
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
Nucleotide Protein
Heading Accession and Version

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