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itgb8 integrin, beta 8 [ Clupea harengus (Atlantic herring) ]

Gene ID: 105903729, updated on 18-Jun-2024

Summary

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Gene symbol
itgb8
Gene description
integrin, beta 8
See related
Ensembl:ENSCHAG00020012823
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 19
Exon count:
15
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 19 NC_045170.1 (19835156..19858117)

Chromosome 19 - NC_045170.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 196 Neighboring gene RNA polymerase I subunit F Neighboring gene sp8 transcription factor a Neighboring gene sp4 transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045170.1 Chromosome 19 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin beta-8
Names
integrin subunit beta 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045170.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    19835156..19858117
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012831515.3 → XP_012686969.1  integrin beta-8

    UniProtKB/TrEMBL
    A0A6P3W1K3
    Related
    ENSCHAP00020028080.1, ENSCHAT00020030215.1
    Conserved Domains (1) summary
    cl00057
    Location:44 → 465
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Nucleotide Protein
Heading Accession and Version

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