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dnlz DNL-type zinc finger [ Clupea harengus (Atlantic herring) ]

Gene ID: 105902553, updated on 18-Jun-2024

Summary

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Gene symbol
dnlz
Gene description
DNL-type zinc finger
See related
Ensembl:ENSCHAG00020010014
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Orthologs
human zebrafish all
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Genomic context

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See dnlz in Genome Data Viewer
Location:
chromosome: 12
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 12 NC_045163.1 (20918612..20921774)

Chromosome 12 - NC_045163.1Genomic Context describing neighboring genes Neighboring gene phytanoyl-CoA dioxygenase domain containing 1 Neighboring gene leucine rich repeat containing 8 VRAC subunit Aa Neighboring gene Rap guanine nucleotide exchange factor (GEF) 1b Neighboring gene uridine-cytidine kinase 1 Neighboring gene LIM homeobox transcription factor 1, beta a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045163.1 Chromosome 12 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-folding chaperone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein stabilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNL-type zinc finger protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045163.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    20918612..20921774
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012830169.3 → XP_012685623.2  DNL-type zinc finger protein

    UniProtKB/TrEMBL
    A0A6P3VZP4
    Related
    ENSCHAP00020021928.1, ENSCHAT00020023279.1
    Conserved Domains (1) summary
    pfam05180
    Location:92 → 156
    zf-DNL; DNL zinc finger
Nucleotide Protein
Heading Accession and Version

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