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prkrip1 PRKR interacting protein 1 [ Clupea harengus (Atlantic herring) ]

Gene ID: 105895338, updated on 18-Jun-2024

Summary

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Gene symbol
prkrip1
Gene description
PRKR interacting protein 1
See related
Ensembl:ENSCHAG00020018140
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 8 NC_045159.1 (3600822..3604904, complement)

Chromosome 8 - NC_045159.1Genomic Context describing neighboring genes Neighboring gene RAS p21 protein activator 4 Neighboring gene uroplakin 3b Neighboring gene trichohyalin-like Neighboring gene VPS37D subunit of ESCRT-I

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045159.1 Chromosome 8 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PRKR-interacting protein 1 homolog
Names
PRKR interacting protein 1 (IL11 inducible)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045159.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    3600822..3604904 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012821959.3 → XP_012677413.1  PRKR-interacting protein 1 homolog

    UniProtKB/TrEMBL
    A0A6P3VNY2
    Related
    ENSCHAP00020041252.1, ENSCHAT00020044164.1
    Conserved Domains (1) summary
    pfam06658
    Location:41 → 123
    DUF1168; Protein of unknown function (DUF1168)
Nucleotide Protein
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