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CAPRIN2 caprin family member 2 [ Microcebus murinus (gray mouse lemur) ]

Gene ID: 105862041, updated on 13-Mar-2024

Summary

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Gene symbol
CAPRIN2
Gene description
caprin family member 2
See related
Ensembl:ENSMICG00000010650
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcebus murinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 21
Exon count:
23
Annotation release Status Assembly Chr Location
101 current Mmur_3.0 (GCF_000165445.2) 21 NC_033680.1 (592216..643758)
100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012195531.1 (2036443..2087400, complement)

Chromosome 21 - NC_033680.1Genomic Context describing neighboring genes Neighboring gene DENN domain containing 5B Neighboring gene peptide chain release factor 1-like, mitochondrial pseudogene Neighboring gene SIN3-HDAC complex associated factor Neighboring gene importin 8 Neighboring gene uncharacterized LOC105862282

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
caprin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmur_3.0 Primary Assembly

Genomic

  1. NC_033680.1 Reference Mmur_3.0 Primary Assembly

    Range
    592216..643758
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020282994.1 → XP_020138583.1  caprin-2 isoform X8

    UniProtKB/TrEMBL
    A0A8B7WTM1, A0A8C5VG70
    Conserved Domains (3) summary
    pfam00386
    Location:914 → 1039
    C1q; C1q domain
    pfam12287
    Location:538 → 850
    Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
    cl25732
    Location:56 → 428
    SMC_N; RecF/RecN/SMC N terminal domain

  2. XM_020282990.1 → XP_020138579.1  caprin-2 isoform X6

    UniProtKB/TrEMBL
    A0A8B7WTA3, A0A8C5VG70
    Conserved Domains (3) summary
    pfam00386
    Location:939 → 1064
    C1q; C1q domain
    pfam12287
    Location:563 → 875
    Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
    cl25732
    Location:81 → 453
    SMC_N; RecF/RecN/SMC N terminal domain

  3. XM_020282991.1 → XP_020138580.1  caprin-2 isoform X6

    UniProtKB/TrEMBL
    A0A8B7WTA3, A0A8C5VG70
    Conserved Domains (3) summary
    pfam00386
    Location:939 → 1064
    C1q; C1q domain
    pfam12287
    Location:563 → 875
    Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
    cl25732
    Location:81 → 453
    SMC_N; RecF/RecN/SMC N terminal domain

  4. XM_020282992.1 → XP_020138581.1  caprin-2 isoform X6

    UniProtKB/TrEMBL
    A0A8B7WTA3, A0A8C5VG70
    Conserved Domains (3) summary
    pfam00386
    Location:939 → 1064
    C1q; C1q domain
    pfam12287
    Location:563 → 875
    Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
    cl25732
    Location:81 → 453
    SMC_N; RecF/RecN/SMC N terminal domain

  5. XM_020282988.1 → XP_020138577.1  caprin-2 isoform X4

    UniProtKB/TrEMBL
    A0A8B7WT95, A0A8C5VG70
    Conserved Domains (3) summary
    pfam00386
    Location:957 → 1082
    C1q; C1q domain
    pfam12287
    Location:581 → 893
    Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
    cl25732
    Location:99 → 471
    SMC_N; RecF/RecN/SMC N terminal domain

  6. XM_020282997.1 → XP_020138586.1  caprin-2 isoform X12

    UniProtKB/TrEMBL
    A0A8B7WTA8, A0A8C5XGF9
    Conserved Domains (2) summary
    pfam12287
    Location:587 → 899
    Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
    cl25732
    Location:105 → 477
    SMC_N; RecF/RecN/SMC N terminal domain

  7. XM_020283002.1 → XP_020138591.1  caprin-2 isoform X17

    UniProtKB/TrEMBL
    A0A8B7WTB2, A0A8C5XGF9
    Conserved Domains (2) summary
    pfam12287
    Location:587 → 898
    Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
    cl25732
    Location:105 → 477
    SMC_N; RecF/RecN/SMC N terminal domain

  8. XM_020283001.1 → XP_020138590.1  caprin-2 isoform X16

    UniProtKB/TrEMBL
    A0A8B7WUW3, A0A8C5XGF9
    Related
    ENSMICP00000019856.2, ENSMICT00000047531.2
    Conserved Domains (2) summary
    pfam12287
    Location:587 → 879
    Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
    cl26511
    Location:98 → 531
    Neuromodulin_N; Gap junction protein N-terminal region

  9. XM_020282999.1 → XP_020138588.1  caprin-2 isoform X14

    UniProtKB/TrEMBL
    A0A8B7WTM6, A0A8C5XGF9
    Conserved Domains (2) summary
    pfam12287
    Location:587 → 899
    Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
    cl25732
    Location:105 → 477
    SMC_N; RecF/RecN/SMC N terminal domain

  10. XM_020283000.1 → XP_020138589.1  caprin-2 isoform X15

    UniProtKB/TrEMBL
    A0A8B7WTG6, A0A8C5XGF9
    Conserved Domains (2) summary
    pfam12287
    Location:587 → 899
    Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
    cl25732
    Location:105 → 477
    SMC_N; RecF/RecN/SMC N terminal domain

  11. XM_020282985.1 → XP_020138574.1  caprin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8B7WTF0, A0A8C5VG70
    Conserved Domains (3) summary
    pfam00386
    Location:963 → 1088
    C1q; C1q domain
    pfam12287
    Location:587 → 899
    Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
    cl25732
    Location:105 → 477
    SMC_N; RecF/RecN/SMC N terminal domain

  12. XM_020282987.1 → XP_020138576.1  caprin-2 isoform X3

    UniProtKB/TrEMBL
    A0A8B7WT99, A0A8C5VG70
    Conserved Domains (3) summary
    pfam00386
    Location:962 → 1087
    C1q; C1q domain
    pfam12287
    Location:587 → 899
    Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
    cl25732
    Location:105 → 477
    SMC_N; RecF/RecN/SMC N terminal domain

  13. XM_020282986.1 → XP_020138575.1  caprin-2 isoform X2

    UniProtKB/TrEMBL
    A0A8B7WUV0, A0A8C5VG70
    Related
    ENSMICP00000022162.2, ENSMICT00000054459.2
    Conserved Domains (3) summary
    pfam00386
    Location:962 → 1087
    C1q; C1q domain
    pfam12287
    Location:587 → 898
    Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
    cl25732
    Location:105 → 477
    SMC_N; RecF/RecN/SMC N terminal domain

  14. XM_020282989.1 → XP_020138578.1  caprin-2 isoform X5

    UniProtKB/TrEMBL
    A0A8B7WTL6, A0A8C5VG70
    Conserved Domains (3) summary
    pfam00386
    Location:943 → 1068
    C1q; C1q domain
    pfam12287
    Location:587 → 879
    Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
    cl25732
    Location:105 → 477
    SMC_N; RecF/RecN/SMC N terminal domain

  15. XM_020282993.1 → XP_020138582.1  caprin-2 isoform X7

    UniProtKB/TrEMBL
    A0A8B7WT98, A0A8C5VBK6
    Conserved Domains (3) summary
    pfam00386
    Location:916 → 1041
    C1q; C1q domain
    pfam12287
    Location:587 → 852
    Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
    cl25732
    Location:105 → 477
    SMC_N; RecF/RecN/SMC N terminal domain

  16. XM_020282995.1 → XP_020138584.1  caprin-2 isoform X9

    UniProtKB/TrEMBL
    A0A8B7WTG1, A0A8C5VBK6
    Conserved Domains (3) summary
    pfam00386
    Location:896 → 1021
    C1q; C1q domain
    pfam12287
    Location:587 → 832
    Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
    cl25732
    Location:105 → 477
    SMC_N; RecF/RecN/SMC N terminal domain

  17. XM_012748064.2 → XP_012603518.1  caprin-2 isoform X10

    UniProtKB/TrEMBL
    A0A8B7F6U8, A0A8C5VBK6
    Related
    ENSMICP00000019708.2, ENSMICT00000049006.2
    Conserved Domains (2) summary
    pfam00386
    Location:915 → 1040
    C1q; C1q domain
    pfam12287
    Location:595 → 845
    Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term

  18. XM_020282996.1 → XP_020138585.1  caprin-2 isoform X11

    UniProtKB/TrEMBL
    A0A8B7WUV9, A0A8C5VBK6
    Conserved Domains (3) summary
    pfam00386
    Location:881 → 1006
    C1q; C1q domain
    pfam12287
    Location:587 → 817
    Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
    cl25732
    Location:105 → 477
    SMC_N; RecF/RecN/SMC N terminal domain

  19. XM_020282998.1 → XP_020138587.1  caprin-2 isoform X13

    UniProtKB/TrEMBL
    A0A8B7WTA4, A0A8C5VG70
    Conserved Domains (4) summary
    pfam00386
    Location:792 → 917
    C1q; C1q domain
    pfam10243
    Location:215 → 457
    MIP-T3; Microtubule-binding protein MIP-T3
    pfam12287
    Location:416 → 728
    Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
    cl26511
    Location:121 → 306
    Neuromodulin_N; Gap junction protein N-terminal region
Nucleotide Protein
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