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CAPN10 calpain 10 [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105824832, updated on 13-Mar-2024

Summary

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Gene symbol
CAPN10
Gene description
calpain 10
See related
Ensembl:ENSPCOG00000017565
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012153763.1 (79574..91885)

NW_012153763.1Genomic Context describing neighboring genes Neighboring gene dual specificity phosphatase 28 Neighboring gene arginyl aminopeptidase like 1 Neighboring gene G protein-coupled receptor 35 Neighboring gene aquaporin-12B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012153763.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-dependent cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calpain-10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012153763.1 Reference Pcoq_1.0 Primary Assembly

    Range
    79574..91885
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012662430.1 → XP_012517884.1  calpain-10 isoform X1

    UniProtKB/TrEMBL
    A0A2K6FDI8, A0A2K6FDK8
    Related
    ENSPCOP00000012054.1, ENSPCOT00000022646.1
    Conserved Domains (3) summary
    smart00720
    Location:340 → 496
    calpain_III; calpain_III domain
    cd00044
    Location:12 → 321
    CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
    cd00214
    Location:514 → 655
    Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...

  2. XM_012662431.1 → XP_012517885.1  calpain-10 isoform X2

    Conserved Domains (2) summary
    smart00720
    Location:340 → 496
    calpain_III; calpain_III domain
    cd00044
    Location:12 → 321
    CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
Nucleotide Protein
Heading Accession and Version

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