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DDX42 DEAD-box helicase 42 [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105822577, updated on 13-Mar-2024

Summary

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Gene symbol
DDX42
Gene description
DEAD-box helicase 42
See related
Ensembl:ENSPCOG00000001559
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012135969.1 (1003410..1055262, complement)

NW_012135969.1Genomic Context describing neighboring genes Neighboring gene proteasome 26S subunit, ATPase 5 Neighboring gene FtsJ RNA 2'-O-methyltransferase 3 Neighboring gene coiled-coil domain containing 47 Neighboring gene STE20 related adaptor alpha

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012135969.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent RNA helicase DDX42

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012135969.1 Reference Pcoq_1.0 Primary Assembly

    Range
    1003410..1055262 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012659581.1 → XP_012515035.1  ATP-dependent RNA helicase DDX42

    UniProtKB/TrEMBL
    A0A2K6EFT9
    Related
    ENSPCOP00000000593.1, ENSPCOT00000002010.1
    Conserved Domains (3) summary
    smart00487
    Location:237 → 428
    DEXDc; DEAD-like helicases superfamily
    cd00079
    Location:424 → 555
    HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
    cl21455
    Location:268 → 413
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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Gene LinkOut

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