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CENPB centromere protein B [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105806218, updated on 13-Mar-2024

Summary

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Gene symbol
CENPB
Gene description
centromere protein B
See related
Ensembl:ENSPCOG00000013623
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See CENPB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012138191.1 (5650049..5652886)

NW_012138191.1Genomic Context describing neighboring genes Neighboring gene adaptor related protein complex 5 subunit sigma 1 Neighboring gene cell division cycle 25B Neighboring gene sperm flagellar 1 Neighboring gene adipose secreted signaling protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012138191.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromosome, centromeric region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
major centromere autoantigen B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012138191.1 Reference Pcoq_1.0 Primary Assembly

    Range
    5650049..5652886
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012639301.1 → XP_012494755.1  major centromere autoantigen B isoform X2

    UniProtKB/TrEMBL
    A0A2K6EUM4
    Related
    ENSPCOP00000005442.1, ENSPCOT00000015823.1
    Conserved Domains (4) summary
    smart00674
    Location:74 → 135
    CENPB; Putative DNA-binding domain in centromere protein B, mouse jerky and transposases
    pfam04218
    Location:2 → 56
    CENP-B_N; CENP-B N-terminal DNA-binding domain
    pfam09026
    Location:546 → 605
    CENP-B_dimeris; Centromere protein B dimerization domain
    cl21549
    Location:222 → 384
    rve; Integrase core domain

  2. XM_012639300.1 → XP_012494754.1  major centromere autoantigen B isoform X1

    Conserved Domains (4) summary
    smart00674
    Location:74 → 135
    CENPB; Putative DNA-binding domain in centromere protein B, mouse jerky and transposases
    pfam04218
    Location:2 → 56
    CENP-B_N; CENP-B N-terminal DNA-binding domain
    pfam09026
    Location:546 → 563
    CENP-B_dimeris; Centromere protein B dimerization domain
    cl21549
    Location:222 → 384
    rve; Integrase core domain
Nucleotide Protein
Heading Accession and Version

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