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PHETA2 PH domain containing endocytic trafficking adaptor 2 [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105805269, updated on 13-Mar-2024

Summary

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Gene symbol
PHETA2
Gene description
PH domain containing endocytic trafficking adaptor 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Also known as
FAM109B
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012136747.1 (1334129..1337668, complement)

NW_012136747.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase subunit A6 Neighboring gene single-pass membrane protein with aspartate rich tail 1 Neighboring gene alpha-N-acetylgalactosaminidase Neighboring gene ubiquitin-40S ribosomal protein S27a pseudogene Neighboring gene WBP2 N-terminal like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012136747.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in receptor recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde transport, endosome to Golgi IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sesquipedalian-2
Names
family with sequence similarity 109 member B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012136747.1 Reference Pcoq_1.0 Primary Assembly

    Range
    1334129..1337668 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012638131.1 → XP_012493585.1  sesquipedalian-2 isoform X1

    Conserved Domains (2) summary
    pfam00169
    Location:29 → 129
    PH; PH domain
    cl17171
    Location:20 → 147
    PH-like; Pleckstrin homology-like domain

  2. XM_012638132.1 → XP_012493586.1  sesquipedalian-2 isoform X2

    Conserved Domains (2) summary
    pfam00169
    Location:20 → 120
    PH; PH domain
    cl17171
    Location:11 → 138
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
Heading Accession and Version

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