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TMEM39B transmembrane protein 39B [ Aotus nancymaae (Ma's night monkey) ]

Gene ID: 105708572, updated on 6-Jun-2024

Summary

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Gene symbol
TMEM39B
Gene description
transmembrane protein 39B
See related
Ensembl:ENSANAG00000023084
Gene type
protein coding
RefSeq status
MODEL
Organism
Aotus nancymaae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Aotidae; Aotus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_04 current 86718_ANA_hifiasm-v0.15.2.pri (GCF_030222135.1) Unplaced Scaffold NW_026988467.1 (28593385..28621023)
101 previous assembly Anan_2.0 (GCF_000952055.2) Unplaced Scaffold NW_018512000.1 (18246293..18273387)

NW_026988467.1Genomic Context describing neighboring genes Neighboring gene SAP domain-containing ribonucleoprotein-like Neighboring gene KH RNA binding domain containing, signal transduction associated 1 Neighboring gene U6 spliceosomal RNA Neighboring gene karyopherin subunit alpha 6 Neighboring gene taxilin alpha

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane protein 39B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030222135.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

Genomic

  1. NW_026988467.1 Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

    Range
    28593385..28621023
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012440113.2 → XP_012295536.1  transmembrane protein 39B isoform X2

    UniProtKB/TrEMBL
    A0A2K5CNF2
    Conserved Domains (1) summary
    pfam10271
    Location:51 → 478
    Tmp39; Putative transmembrane protein

  2. XM_021668338.2 → XP_021524013.1  transmembrane protein 39B isoform X4

    Conserved Domains (1) summary
    pfam10271
    Location:1 → 279
    Tmp39; Putative transmembrane protein

  3. XM_012440112.3 → XP_012295535.1  transmembrane protein 39B isoform X1

    UniProtKB/TrEMBL
    A0A2K5CND9, A0A2K5CNF2
    Related
    ENSANAP00000010218.1
    Conserved Domains (1) summary
    pfam10271
    Location:64 → 491
    Tmp39; Putative transmembrane protein

  4. XM_012440114.3 → XP_012295537.2  transmembrane protein 39B isoform X3

    UniProtKB/TrEMBL
    A0A2K5CNF2

  5. XM_064363617.1 → XP_064219687.1  transmembrane protein 39B isoform X4

Nucleotide Protein
Heading Accession and Version

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