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ADAMTSL4 ADAMTS like 4 [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105590192, updated on 13-Mar-2024

Summary

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Gene symbol
ADAMTSL4
Gene description
ADAMTS like 4
See related
Ensembl:ENSCATG00000043576
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012001087.1 (697190..711196)

NW_012001087.1Genomic Context describing neighboring genes Neighboring gene threonyl-tRNA synthetase 2, mitochondrial Neighboring gene extracellular matrix protein 1 Neighboring gene uncharacterized LOC105590193 Neighboring gene eukaryotic translation initiation factor 3 subunit F pseudogene Neighboring gene MCL1 apoptosis regulator, BCL2 family member

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012001087.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADAMTS-like protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012001087.1 Reference Caty_1.0

    Range
    697190..711196
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012069495.1 → XP_011924885.1  ADAMTS-like protein 4 isoform X1

    See identical proteins and their annotated locations for XP_011924885.1

    UniProtKB/TrEMBL
    A0A2K5NWH7
    Conserved Domains (3) summary
    smart00209
    Location:1034 → 1083
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:542 → 656
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:1090 → 1119
    PLAC; PLAC (protease and lacunin) domain

  2. XM_012069499.1 → XP_011924889.1  ADAMTS-like protein 4 isoform X4

    See identical proteins and their annotated locations for XP_011924889.1

    UniProtKB/TrEMBL
    A0A2K5NWH3, A0A2K5NWH7
    Conserved Domains (3) summary
    smart00209
    Location:979 → 1028
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:487 → 601
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:1035 → 1064
    PLAC; PLAC (protease and lacunin) domain

  3. XM_012069502.1 → XP_011924892.1  ADAMTS-like protein 4 isoform X5

    See identical proteins and their annotated locations for XP_011924892.1

    UniProtKB/TrEMBL
    A0A2K5NWH7
    Conserved Domains (3) summary
    smart00209
    Location:822 → 871
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:330 → 444
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:878 → 907
    PLAC; PLAC (protease and lacunin) domain

  4. XM_012069503.1 → XP_011924893.1  ADAMTS-like protein 4 isoform X5

    See identical proteins and their annotated locations for XP_011924893.1

    UniProtKB/TrEMBL
    A0A2K5NWH7
    Conserved Domains (3) summary
    smart00209
    Location:822 → 871
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:330 → 444
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:878 → 907
    PLAC; PLAC (protease and lacunin) domain

  5. XM_012069500.1 → XP_011924890.1  ADAMTS-like protein 4 isoform X4

    See identical proteins and their annotated locations for XP_011924890.1

    UniProtKB/TrEMBL
    A0A2K5NWH3, A0A2K5NWH7
    Related
    ENSCATP00000041883.1, ENSCATT00000066313.1
    Conserved Domains (3) summary
    smart00209
    Location:979 → 1028
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:487 → 601
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:1035 → 1064
    PLAC; PLAC (protease and lacunin) domain

  6. XM_012069494.1 → XP_011924884.1  ADAMTS-like protein 4 isoform X1

    See identical proteins and their annotated locations for XP_011924884.1

    UniProtKB/TrEMBL
    A0A2K5NWH7
    Conserved Domains (3) summary
    smart00209
    Location:1034 → 1083
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:542 → 656
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:1090 → 1119
    PLAC; PLAC (protease and lacunin) domain

  7. XM_012069498.1 → XP_011924888.1  ADAMTS-like protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A2K5NWH7
    Conserved Domains (3) summary
    smart00209
    Location:970 → 1019
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:478 → 592
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:1026 → 1055
    PLAC; PLAC (protease and lacunin) domain

  8. XM_012069497.1 → XP_011924887.1  ADAMTS-like protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A2K5NWH7
    Conserved Domains (2) summary
    smart00209
    Location:1034 → 1083
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:542 → 656
    ADAM_spacer1; ADAM-TS Spacer 1

  9. XM_012069501.1 → XP_011924891.1  ADAMTS-like protein 4 isoform X5

    See identical proteins and their annotated locations for XP_011924891.1

    UniProtKB/TrEMBL
    A0A2K5NWH7
    Conserved Domains (3) summary
    smart00209
    Location:822 → 871
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:330 → 444
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:878 → 907
    PLAC; PLAC (protease and lacunin) domain

RNA

  1. XR_001016606.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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