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TRMT13 tRNA methyltransferase 13 homolog [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105590146, updated on 13-Mar-2024

Summary

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Gene symbol
TRMT13
Gene description
tRNA methyltransferase 13 homolog
See related
Ensembl:ENSCATG00000033556
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012001076.1 (5574725..5592033, complement)

NW_012001076.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105590149 Neighboring gene dihydrolipoamide branched chain transacylase E2 Neighboring gene leucine rich repeat containing 39 Neighboring gene SAS-6 centriolar assembly protein Neighboring gene major facilitator superfamily domain containing 14A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012001076.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tRNA 2'-O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA:m(4)X modification enzyme TRM13 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012001076.1 Reference Caty_1.0

    Range
    5574725..5592033 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012069385.1 → XP_011924775.1  tRNA:m(4)X modification enzyme TRM13 homolog isoform X2

    UniProtKB/TrEMBL
    A0A2K5M2V0
    Related
    ENSCATP00000019520.1, ENSCATT00000043702.1
    Conserved Domains (3) summary
    pfam05206
    Location:165 → 469
    TRM13; Methyltransferase TRM13
    pfam05253
    Location:59 → 80
    zf-U11-48K; U11-48K-like CHHC zinc finger
    pfam11722
    Location:17 → 45
    zf-TRM13_CCCH; CCCH zinc finger in TRM13 protein

  2. XM_012069386.1 → XP_011924776.1  tRNA:m(4)X modification enzyme TRM13 homolog isoform X3

    Conserved Domains (2) summary
    pfam05206
    Location:117 → 434
    TRM13; Methyltransferase TRM13
    pfam05253
    Location:11 → 32
    zf-U11-48K; U11-48K-like CHHC zinc finger

  3. XM_012069384.1 → XP_011924774.1  tRNA:m(4)X modification enzyme TRM13 homolog isoform X1

    Conserved Domains (3) summary
    pfam05206
    Location:165 → 482
    TRM13; Methyltransferase TRM13
    pfam05253
    Location:59 → 80
    zf-U11-48K; U11-48K-like CHHC zinc finger
    pfam11722
    Location:17 → 45
    zf-TRM13_CCCH; CCCH zinc finger in TRM13 protein
Nucleotide Protein
Heading Accession and Version

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