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BCORL1 BCL6 corepressor like 1 [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105586272, updated on 13-Mar-2024

Summary

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Gene symbol
BCORL1
Gene description
BCL6 corepressor like 1
See related
Ensembl:ENSCATG00000043754
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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See BCORL1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012009801.1 (4989521..5068077, complement)

NW_012009801.1Genomic Context describing neighboring genes Neighboring gene apoptosis inducing factor mitochondria associated 1 Neighboring gene E74 like ETS transcription factor 4 Neighboring gene UTP14A small subunit processome component Neighboring gene sal-like protein 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012009801.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BCL-6 corepressor-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012009801.1 Reference Caty_1.0

    Range
    4989521..5068077 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012061093.1 → XP_011916483.1  BCL-6 corepressor-like protein 1 isoform X1

    See identical proteins and their annotated locations for XP_011916483.1

    UniProtKB/TrEMBL
    A0A2K5NXK5, A0A2K5NXN6
    Related
    ENSCATP00000042253.1, ENSCATT00000066687.1
    Conserved Domains (4) summary
    cd00204
    Location:1490 → 1604
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd14260
    Location:1666 → 1779
    PUFD_like_1; PCGF Ub-like fold discriminator of BCOR-like 1
    pfam12796
    Location:1500 → 1591
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:1496 → 1527
    ANK; ANK repeat [structural motif]

  2. XM_012061090.1 → XP_011916480.1  BCL-6 corepressor-like protein 1 isoform X1

    See identical proteins and their annotated locations for XP_011916480.1

    UniProtKB/TrEMBL
    A0A2K5NXK5, A0A2K5NXN6
    Conserved Domains (4) summary
    cd00204
    Location:1490 → 1604
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd14260
    Location:1666 → 1779
    PUFD_like_1; PCGF Ub-like fold discriminator of BCOR-like 1
    pfam12796
    Location:1500 → 1591
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:1496 → 1527
    ANK; ANK repeat [structural motif]

  3. XM_012061098.1 → XP_011916488.1  BCL-6 corepressor-like protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A2K5NXN6
    Conserved Domains (5) summary
    cd00204
    Location:1360 → 1474
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd14260
    Location:1536 → 1649
    PUFD_like_1; PCGF Ub-like fold discriminator of BCOR-like 1
    pfam12796
    Location:1370 → 1461
    Ank_2; Ankyrin repeats (3 copies)
    pfam15808
    Location:1184 → 1297
    BCOR; BCL-6 co-repressor, non-ankyrin-repeat region
    sd00045
    Location:1366 → 1397
    ANK; ANK repeat [structural motif]

  4. XM_012061087.1 → XP_011916477.1  BCL-6 corepressor-like protein 1 isoform X1

    See identical proteins and their annotated locations for XP_011916477.1

    UniProtKB/TrEMBL
    A0A2K5NXK5, A0A2K5NXN6
    Conserved Domains (4) summary
    cd00204
    Location:1490 → 1604
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd14260
    Location:1666 → 1779
    PUFD_like_1; PCGF Ub-like fold discriminator of BCOR-like 1
    pfam12796
    Location:1500 → 1591
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:1496 → 1527
    ANK; ANK repeat [structural motif]

  5. XM_012061096.1 → XP_011916486.1  BCL-6 corepressor-like protein 1 isoform X2

    See identical proteins and their annotated locations for XP_011916486.1

    UniProtKB/TrEMBL
    A0A2K5NXN6
    Conserved Domains (4) summary
    cd00204
    Location:1392 → 1506
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd14260
    Location:1568 → 1681
    PUFD_like_1; PCGF Ub-like fold discriminator of BCOR-like 1
    pfam12796
    Location:1402 → 1493
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:1398 → 1429
    ANK; ANK repeat [structural motif]

  6. XM_012061088.1 → XP_011916478.1  BCL-6 corepressor-like protein 1 isoform X1

    See identical proteins and their annotated locations for XP_011916478.1

    UniProtKB/TrEMBL
    A0A2K5NXK5, A0A2K5NXN6
    Related
    ENSCATP00000042260.1, ENSCATT00000066694.1
    Conserved Domains (4) summary
    cd00204
    Location:1490 → 1604
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd14260
    Location:1666 → 1779
    PUFD_like_1; PCGF Ub-like fold discriminator of BCOR-like 1
    pfam12796
    Location:1500 → 1591
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:1496 → 1527
    ANK; ANK repeat [structural motif]

  7. XM_012061091.1 → XP_011916481.1  BCL-6 corepressor-like protein 1 isoform X1

    See identical proteins and their annotated locations for XP_011916481.1

    UniProtKB/TrEMBL
    A0A2K5NXK5, A0A2K5NXN6
    Related
    ENSCATP00000042272.1, ENSCATT00000066706.1
    Conserved Domains (4) summary
    cd00204
    Location:1490 → 1604
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd14260
    Location:1666 → 1779
    PUFD_like_1; PCGF Ub-like fold discriminator of BCOR-like 1
    pfam12796
    Location:1500 → 1591
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:1496 → 1527
    ANK; ANK repeat [structural motif]

  8. XM_012061097.1 → XP_011916487.1  BCL-6 corepressor-like protein 1 isoform X2

    See identical proteins and their annotated locations for XP_011916487.1

    UniProtKB/TrEMBL
    A0A2K5NXN6
    Conserved Domains (4) summary
    cd00204
    Location:1392 → 1506
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd14260
    Location:1568 → 1681
    PUFD_like_1; PCGF Ub-like fold discriminator of BCOR-like 1
    pfam12796
    Location:1402 → 1493
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:1398 → 1429
    ANK; ANK repeat [structural motif]

  9. XM_012061094.1 → XP_011916484.1  BCL-6 corepressor-like protein 1 isoform X1

    See identical proteins and their annotated locations for XP_011916484.1

    UniProtKB/TrEMBL
    A0A2K5NXK5, A0A2K5NXN6
    Conserved Domains (4) summary
    cd00204
    Location:1490 → 1604
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd14260
    Location:1666 → 1779
    PUFD_like_1; PCGF Ub-like fold discriminator of BCOR-like 1
    pfam12796
    Location:1500 → 1591
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:1496 → 1527
    ANK; ANK repeat [structural motif]

  10. XM_012061092.1 → XP_011916482.1  BCL-6 corepressor-like protein 1 isoform X1

    See identical proteins and their annotated locations for XP_011916482.1

    UniProtKB/TrEMBL
    A0A2K5NXK5, A0A2K5NXN6
    Related
    ENSCATP00000042286.1, ENSCATT00000066720.1
    Conserved Domains (4) summary
    cd00204
    Location:1490 → 1604
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd14260
    Location:1666 → 1779
    PUFD_like_1; PCGF Ub-like fold discriminator of BCOR-like 1
    pfam12796
    Location:1500 → 1591
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:1496 → 1527
    ANK; ANK repeat [structural motif]

  11. XM_012061095.1 → XP_011916485.1  BCL-6 corepressor-like protein 1 isoform X1

    See identical proteins and their annotated locations for XP_011916485.1

    UniProtKB/TrEMBL
    A0A2K5NXK5, A0A2K5NXN6
    Conserved Domains (4) summary
    cd00204
    Location:1490 → 1604
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd14260
    Location:1666 → 1779
    PUFD_like_1; PCGF Ub-like fold discriminator of BCOR-like 1
    pfam12796
    Location:1500 → 1591
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:1496 → 1527
    ANK; ANK repeat [structural motif]
Nucleotide Protein
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