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RNFT1 ring finger protein, transmembrane 1 [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105583340, updated on 13-Mar-2024

Summary

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Gene symbol
RNFT1
Gene description
ring finger protein, transmembrane 1
See related
Ensembl:ENSCATG00000038416
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012007700.1 (9188263..9201426, complement)

NW_012007700.1Genomic Context describing neighboring genes Neighboring gene tubulin delta 1 Neighboring gene NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial pseudogene Neighboring gene ribosomal protein S6 kinase B1 Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene obg-like ATPase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012007700.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of ERAD pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RING finger and transmembrane domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012007700.1 Reference Caty_1.0

    Range
    9188263..9201426 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012055014.1 → XP_011910404.1  RING finger and transmembrane domain-containing protein 1 isoform X3

    Conserved Domains (2) summary
    COG5243
    Location:254 → 360
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]
    cd16741
    Location:321 → 360
    RING-HC_RNFT1; RING finger, HC subclass, found in RING finger and transmembrane domain-containing protein 1 (RNFT1)

  2. XM_012055013.1 → XP_011910403.1  RING finger and transmembrane domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A2K5MZ39
    Related
    ENSCATP00000030479.1, ENSCATT00000054742.1
    Conserved Domains (1) summary
    cd16741
    Location:352 → 391
    RING-HC_RNFT1; RING finger, HC subclass, found in RING finger and transmembrane domain-containing protein 1 (RNFT1)

  3. XM_012055012.1 → XP_011910402.1  RING finger and transmembrane domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2K5MZ03
    Related
    ENSCATP00000030478.1, ENSCATT00000054741.1
    Conserved Domains (1) summary
    cd16741
    Location:374 → 413
    RING-HC_RNFT1; RING finger, HC subclass, found in RING finger and transmembrane domain-containing protein 1 (RNFT1)
Nucleotide Protein
Heading Accession and Version

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