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SOD1 superoxide dismutase 1 [ Colobus angolensis palliatus ]

Gene ID: 105520964, updated on 13-Mar-2024

Summary

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Gene symbol
SOD1
Gene description
superoxide dismutase 1
See related
Ensembl:ENSCANG00000030574
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012117266.1 (382622..391796, complement)

NW_012117266.1Genomic Context describing neighboring genes Neighboring gene translationally-controlled tumor protein pseudogene Neighboring gene SR-related CTD associated factor 4 Neighboring gene F-box/WD repeat-containing protein 11-like Neighboring gene 40S ribosomal protein S24 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012117266.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables superoxide dismutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in removal of superoxide radicals IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
superoxide dismutase [Cu-Zn]
Names
superoxide dismutase 1, soluble

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012117266.1 Reference Cang.pa_1.0

    Range
    382622..391796 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011954978.1 → XP_011810368.1  superoxide dismutase [Cu-Zn] isoform X2

    UniProtKB/TrEMBL
    A0A2K5HBV0, A0A2K5IC95
    Related
    ENSCANP00000014269.1, ENSCANT00000037192.1
    Conserved Domains (1) summary
    cd00305
    Location:3 → 147
    Cu-Zn_Superoxide_Dismutase; Copper/zinc superoxide dismutase (SOD). superoxide dismutases catalyse the conversion of superoxide radicals to molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the copper/zinc-binding family is one. Defects in the ...

  2. XM_011954977.1 → XP_011810367.1  superoxide dismutase [Cu-Zn] isoform X1

    UniProtKB/TrEMBL
    A0A2K5HBV0
    Conserved Domains (1) summary
    cd00305
    Location:3 → 149
    Cu-Zn_Superoxide_Dismutase; Copper/zinc superoxide dismutase (SOD). superoxide dismutases catalyse the conversion of superoxide radicals to molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the copper/zinc-binding family is one. Defects in the ...

  3. XM_011954979.1 → XP_011810369.1  superoxide dismutase [Cu-Zn] isoform X3

    UniProtKB/TrEMBL
    A0A2K5HBV0
    Conserved Domains (1) summary
    cd00305
    Location:3 → 146
    Cu-Zn_Superoxide_Dismutase; Copper/zinc superoxide dismutase (SOD). superoxide dismutases catalyse the conversion of superoxide radicals to molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the copper/zinc-binding family is one. Defects in the ...
Nucleotide Protein
Heading Accession and Version

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