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IGDCC4 immunoglobulin superfamily DCC subclass member 4 [ Colobus angolensis palliatus ]

Gene ID: 105510668, updated on 13-Mar-2024

Summary

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Gene symbol
IGDCC4
Gene description
immunoglobulin superfamily DCC subclass member 4
See related
Ensembl:ENSCANG00000038798
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012115043.1 (5888932..5916645)

NW_012115043.1Genomic Context describing neighboring genes Neighboring gene dipeptidyl peptidase 8-like Neighboring gene dipeptidyl peptidase 8 Neighboring gene immunoglobulin superfamily DCC subclass member 3 Neighboring gene poly(ADP-ribose) polymerase family member 16

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012115043.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
immunoglobulin superfamily DCC subclass member 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012115043.1 Reference Cang.pa_1.0

    Range
    5888932..5916645
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011940561.1 → XP_011795951.1  immunoglobulin superfamily DCC subclass member 4

    UniProtKB/TrEMBL
    A0A2K5JN43, A0A2K5JN44
    Related
    ENSCANP00000030275.1, ENSCANT00000053479.1
    Conserved Domains (6) summary
    smart00408
    Location:139 → 202
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:233 → 314
    IG_like; Immunoglobulin like
    cd00063
    Location:833 → 925
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:318 → 405
    I-set; Immunoglobulin I-set domain
    pfam00041
    Location:413 → 498
    fn3; Fibronectin type III domain
    cl11960
    Location:333 → 405
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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