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YTHDF1 YTH N6-methyladenosine RNA binding protein F1 [ Colobus angolensis palliatus ]

Gene ID: 105506342, updated on 13-Mar-2024

Summary

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Gene symbol
YTHDF1
Gene description
YTH N6-methyladenosine RNA binding protein F1
See related
Ensembl:ENSCANG00000029082
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012114444.1 (1350227..1370293)

NW_012114444.1Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member C5 Neighboring gene sodium/potassium transporting ATPase interacting 4 Neighboring gene baculoviral IAP repeat containing 7 Neighboring gene uncharacterized LOC105506341 Neighboring gene basic helix-loop-helix family member e23

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012114444.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N6-methyladenosine-containing RNA reader activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA destabilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
YTH domain-containing family protein 1
Names
YTH N6-methyladenosine RNA binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012114444.1 Reference Cang.pa_1.0

    Range
    1350227..1370293
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011934434.1 → XP_011789824.1  YTH domain-containing family protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2K5I461
    Related
    ENSCANP00000011341.1, ENSCANT00000034238.1
    Conserved Domains (2) summary
    pfam04146
    Location:392 → 525
    YTH; YT521-B-like domain
    cl09930
    Location:257 → 302
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

  2. XM_011934435.1 → XP_011789825.1  YTH domain-containing family protein 1 isoform X2

    Conserved Domains (2) summary
    pfam04146
    Location:340 → 473
    YTH; YT521-B-like domain
    cl09930
    Location:205 → 250
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.
Nucleotide Protein
Heading Accession and Version

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