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NR2C1 nuclear receptor subfamily 2 group C member 1 [ Colobus angolensis palliatus ]

Gene ID: 105506013, updated on 13-Mar-2024

Summary

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Gene symbol
NR2C1
Gene description
nuclear receptor subfamily 2 group C member 1
See related
Ensembl:ENSCANG00000027505
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012110919.1 (6172836..6226719, complement)

NW_012110919.1Genomic Context describing neighboring genes Neighboring gene keratin, type I cytoskeletal 19 pseudogene Neighboring gene MOB-like protein phocein pseudogene Neighboring gene NADH:ubiquinone oxidoreductase subunit A12 Neighboring gene peroxiredoxin-6-like Neighboring gene FYVE, RhoGEF and PH domain containing 6 Neighboring gene 60S ribosomal protein L14 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012110919.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear receptor subfamily 2 group C member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012110919.1 Reference Cang.pa_1.0

    Range
    6172836..6226719 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011934016.1 → XP_011789406.1  nuclear receptor subfamily 2 group C member 1 isoform X1

    See identical proteins and their annotated locations for XP_011789406.1

    UniProtKB/TrEMBL
    A0A2K5HVZ9
    Related
    ENSCANP00000008471.1, ENSCANT00000031336.1
    Conserved Domains (2) summary
    cd06952
    Location:369 → 590
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:109 → 195
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  2. XM_011934021.1 → XP_011789411.1  nuclear receptor subfamily 2 group C member 1 isoform X1

    See identical proteins and their annotated locations for XP_011789411.1

    UniProtKB/TrEMBL
    A0A2K5HVZ9
    Conserved Domains (2) summary
    cd06952
    Location:369 → 590
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:109 → 195
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  3. XM_011934037.1 → XP_011789427.1  nuclear receptor subfamily 2 group C member 1 isoform X3

    UniProtKB/TrEMBL
    A0A2K5HVW0
    Related
    ENSCANP00000008480.1, ENSCANT00000031344.1
    Conserved Domains (2) summary
    cd06967
    Location:109 → 195
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers
    cl11397
    Location:369 → 465
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators

  4. XM_011934028.1 → XP_011789418.1  nuclear receptor subfamily 2 group C member 1 isoform X2

    UniProtKB/TrEMBL
    A0A2K5HVW0, A0A2K5HW09
    Related
    ENSCANP00000008481.1, ENSCANT00000031346.1
    Conserved Domains (2) summary
    cd06967
    Location:109 → 195
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers
    cl11397
    Location:369 → 466
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
Nucleotide Protein
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