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SYNRG synergin gamma [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105476893, updated on 13-Mar-2024

Summary

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Gene symbol
SYNRG
Gene description
synergin gamma
See related
Ensembl:ENSMNEG00000026198
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SYNRG in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012016577.1 (11490195..11583720, complement)

NW_012016577.1Genomic Context describing neighboring genes Neighboring gene transcriptional adaptor 2A Neighboring gene uncharacterized LOC105476891 Neighboring gene dual specificity phosphatase 14 Neighboring gene uncharacterized LOC105476894 Neighboring gene DExD-box helicase 52 Neighboring gene HNF1 homeobox B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012016577 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of clathrin coat of trans-Golgi network vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synergin gamma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012016577.1 Reference Mnem_1.0

    Range
    11490195..11583720 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011733207.1 → XP_011731509.1  synergin gamma isoform X6

    UniProtKB/TrEMBL
    A0A2K6B501
    Conserved Domains (2) summary
    cd00052
    Location:404 → 468
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl00928
    Location:116 → 150
    dsDNA_bind; Double-stranded DNA-binding domain

  2. XM_011733203.1 → XP_011731505.1  synergin gamma isoform X3

    UniProtKB/TrEMBL
    A0A2K6B501
    Conserved Domains (2) summary
    cd00052
    Location:404 → 468
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl00928
    Location:116 → 150
    dsDNA_bind; Double-stranded DNA-binding domain

  3. XM_011733216.1 → XP_011731518.1  synergin gamma isoform X14

    UniProtKB/TrEMBL
    A0A2K6B4Y8
    Conserved Domains (3) summary
    cd00052
    Location:225 → 289
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl00928
    Location:116 → 150
    dsDNA_bind; Double-stranded DNA-binding domain
    cl09607
    Location:231 → 379
    Gly_reductase; Glycine/sarcosine/betaine reductase component B subunits

  4. XM_011733213.2 → XP_011731515.1  synergin gamma isoform X12

    UniProtKB/TrEMBL
    A0A2K6B4Y8
    Conserved Domains (3) summary
    cd00052
    Location:225 → 289
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl00928
    Location:116 → 150
    dsDNA_bind; Double-stranded DNA-binding domain
    cl09607
    Location:231 → 379
    Gly_reductase; Glycine/sarcosine/betaine reductase component B subunits

  5. XM_011733211.1 → XP_011731513.1  synergin gamma isoform X10

    UniProtKB/TrEMBL
    A0A2K6B4Y8
    Related
    ENSMNEP00000006472.1, ENSMNET00000030313.1
    Conserved Domains (3) summary
    cd00052
    Location:225 → 289
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl00928
    Location:116 → 150
    dsDNA_bind; Double-stranded DNA-binding domain
    cl09607
    Location:231 → 379
    Gly_reductase; Glycine/sarcosine/betaine reductase component B subunits

  6. XM_011733210.1 → XP_011731512.1  synergin gamma isoform X9

    UniProtKB/TrEMBL
    A0A2K6B4W4, A0A2K6B501
    Related
    ENSMNEP00000006446.1, ENSMNET00000030266.1
    Conserved Domains (3) summary
    cd00052
    Location:303 → 367
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl00928
    Location:116 → 150
    dsDNA_bind; Double-stranded DNA-binding domain
    cl09607
    Location:309 → 457
    Gly_reductase; Glycine/sarcosine/betaine reductase component B subunits

  7. XM_011733208.1 → XP_011731510.1  synergin gamma isoform X7

    UniProtKB/TrEMBL
    A0A2K6B501
    Conserved Domains (2) summary
    cd00052
    Location:326 → 390
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl00928
    Location:116 → 150
    dsDNA_bind; Double-stranded DNA-binding domain

  8. XM_011733206.1 → XP_011731508.1  synergin gamma isoform X5

    UniProtKB/TrEMBL
    A0A2K6B501
    Conserved Domains (2) summary
    cd00052
    Location:404 → 468
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl00928
    Location:116 → 150
    dsDNA_bind; Double-stranded DNA-binding domain

  9. XM_011733205.1 → XP_011731507.1  synergin gamma isoform X4

    UniProtKB/TrEMBL
    A0A2K6B501
    Conserved Domains (2) summary
    cd00052
    Location:404 → 468
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl00928
    Location:116 → 150
    dsDNA_bind; Double-stranded DNA-binding domain

  10. XM_011733201.1 → XP_011731503.1  synergin gamma isoform X1

    UniProtKB/TrEMBL
    A0A2K6B4V3, A0A2K6B501
    Related
    ENSMNEP00000006437.1, ENSMNET00000030249.1
    Conserved Domains (2) summary
    cd00052
    Location:404 → 468
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl00928
    Location:116 → 150
    dsDNA_bind; Double-stranded DNA-binding domain

  11. XM_011733212.1 → XP_011731514.1  synergin gamma isoform X11

    UniProtKB/TrEMBL
    A0A2K6B4Y8
    Conserved Domains (3) summary
    cd00052
    Location:224 → 288
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl00928
    Location:115 → 149
    dsDNA_bind; Double-stranded DNA-binding domain
    cl09607
    Location:230 → 378
    Gly_reductase; Glycine/sarcosine/betaine reductase component B subunits

  12. XM_011733202.1 → XP_011731504.1  synergin gamma isoform X2

    UniProtKB/TrEMBL
    A0A2K6B501
    Conserved Domains (2) summary
    cd00052
    Location:403 → 467
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl00928
    Location:115 → 149
    dsDNA_bind; Double-stranded DNA-binding domain

  13. XM_024791265.1 → XP_024647033.1  synergin gamma isoform X8

    UniProtKB/TrEMBL
    A0A2K6B501
    Conserved Domains (2) summary
    cd00052
    Location:320 → 384
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl25549
    Location:32 → 65
    ARGLU; Arginine and glutamate-rich 1

  14. XM_011733214.2 → XP_011731516.1  synergin gamma isoform X13

    UniProtKB/TrEMBL
    A0A2K6B4Y8
    Conserved Domains (3) summary
    cd00052
    Location:225 → 289
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl00928
    Location:116 → 150
    dsDNA_bind; Double-stranded DNA-binding domain
    cl09607
    Location:231 → 379
    Gly_reductase; Glycine/sarcosine/betaine reductase component B subunits
Nucleotide Protein
Heading Accession and Version

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