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igsf11 immunoglobulin superfamily member 11 [ Takifugu rubripes (torafugu) ]

Gene ID: 105417033, updated on 13-Mar-2024

Summary

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Gene symbol
igsf11
Gene description
immunoglobulin superfamily member 11
See related
Ensembl:ENSTRUG00000010310
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 11
Exon count:
8
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 11 NC_042295.1 (2682592..2728265, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 11 NC_018900.1 (29295..48895, complement)

Chromosome 11 - NC_042295.1Genomic Context describing neighboring genes Neighboring gene RAC-beta serine/threonine-protein kinase Neighboring gene DEAH (Asp-Glu-Ala-His) box polypeptide 40 Neighboring gene cylicin-2-like Neighboring gene cylicin-2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ionotropic glutamate receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
immunoglobulin superfamily member 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042295.1 Reference fTakRub1.2 Primary Assembly

    Range
    2682592..2728265 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029843416.1 → XP_029699276.1  immunoglobulin superfamily member 11 isoform X2

    UniProtKB/TrEMBL
    H2TMN6
    Related
    ENSTRUP00000025942.3, ENSTRUT00000026047.3
    Conserved Domains (2) summary
    pfam07686
    Location:33 → 144
    V-set; Immunoglobulin V-set domain
    pfam13927
    Location:147 → 222
    Ig_3; Immunoglobulin domain

  2. XM_029843415.1 → XP_029699275.1  immunoglobulin superfamily member 11 isoform X1

    UniProtKB/TrEMBL
    A0A674MK73
    Related
    ENSTRUP00000061867.1, ENSTRUT00000064717.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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