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RTRAF RNA transcription, translation and transport factor [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105309377, updated on 30-Mar-2024

Summary

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Gene symbol
RTRAF
Gene description
RNA transcription, translation and transport factor
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888796.1 (13125332..13140317, complement)

NW_011888796.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene nidogen 2 Neighboring gene 5S ribosomal RNA Neighboring gene G protein subunit gamma 2 Neighboring gene FERM domain containing 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888796 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA splicing, via endonucleolytic cleavage and ligation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of tRNA-splicing ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA transcription, translation and transport factor protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888796.1 Reference Pvam_2.0

    Range
    13125332..13140317 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011385496.2 → XP_011383798.1  RNA transcription, translation and transport factor protein

    See identical proteins and their annotated locations for XP_011383798.1

    UniProtKB/TrEMBL
    A0A6P3RLX7
    Conserved Domains (1) summary
    pfam10036
    Location:8 → 243
    RLL; Putative carnitine deficiency-associated protein
Nucleotide Protein
Heading Accession and Version

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