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SSH1 slingshot protein phosphatase 1 [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105303955, updated on 30-Mar-2024

Summary

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Gene symbol
SSH1
Gene description
slingshot protein phosphatase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011889103.1 (696951..749341, complement)

NW_011889103.1Genomic Context describing neighboring genes Neighboring gene selectin P ligand Neighboring gene coronin 1C Neighboring gene small nucleolar RNA SNORA52 Neighboring gene D-amino acid oxidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011889103 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine/serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of actin filament polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein phosphatase Slingshot homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011889103.1 Reference Pvam_2.0

    Range
    696951..749341 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023521894.1 → XP_023377662.1  protein phosphatase Slingshot homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P6BRH2
    Conserved Domains (3) summary
    cd11652
    Location:1 → 194
    SSH-N; N-terminal domain conserved in slingshot (SSH) phosphatases
    cd00127
    Location:265 → 401
    DSPc; Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or ...
    pfam08766
    Location:208 → 260
    DEK_C; DEK C terminal domain

  2. XM_023521895.1 → XP_023377663.1  protein phosphatase Slingshot homolog 1 isoform X2

    UniProtKB/TrEMBL
    A0A6P6BRF0
    Conserved Domains (3) summary
    cd11652
    Location:1 → 147
    SSH-N; N-terminal domain conserved in slingshot (SSH) phosphatases
    cd00127
    Location:218 → 354
    DSPc; Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or ...
    pfam08766
    Location:161 → 213
    DEK_C; DEK C terminal domain
Nucleotide Protein
Heading Accession and Version

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