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TGM6 transglutaminase 6 [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105299275, updated on 30-Mar-2024

Summary

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Gene symbol
TGM6
Gene description
transglutaminase 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888788.1 (540388..561074)

NW_011888788.1Genomic Context describing neighboring genes Neighboring gene serine/threonine kinase 35 Neighboring gene 5S ribosomal RNA Neighboring gene transglutaminase 3 Neighboring gene uncharacterized LOC111746083 Neighboring gene small nuclear ribonucleoprotein polypeptides B and B1 Neighboring gene zinc finger protein 343

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888788 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-glutamine gamma-glutamyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptide cross-linking IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: protein-glutamine gamma-glutamyltransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888788.1 Reference Pvam_2.0

    Range
    540388..561074
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011370940.1 → XP_011369242.1  LOW QUALITY PROTEIN: protein-glutamine gamma-glutamyltransferase 6

    UniProtKB/TrEMBL
    A0A6P3QSP8
    Conserved Domains (4) summary
    smart00460
    Location:324 → 415
    TGc; Transglutaminase/protease-like homologues
    COG1305
    Location:326 → 423
    YebA; Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones]
    pfam00868
    Location:45 → 160
    Transglut_N; Transglutaminase family
    pfam00927
    Location:551 → 656
    Transglut_C; Transglutaminase family, C-terminal ig like domain
Nucleotide Protein
Heading Accession and Version

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