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SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105296479, updated on 30-Mar-2024

Summary

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Gene symbol
SAMHD1
Gene description
SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888906.1 (748679..796025, complement)

NW_011888906.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene TBC/LysM-associated domain containing 2 Neighboring gene U4 spliceosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene UPF0711 protein C18orf21 homolog pseudogene Neighboring gene RB transcriptional corepressor like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888906 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dGTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dGTP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to virus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deoxynucleoside triphosphate triphosphohydrolase SAMHD1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888906.1 Reference Pvam_2.0

    Range
    748679..796025 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011366586.2 → XP_011364888.1  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1

    UniProtKB/TrEMBL
    A0A6P3QKS2
    Conserved Domains (2) summary
    cd09508
    Location:48 → 113
    SAM_HD; SAM domain of HD-phosphohydrolase
    COG1078
    Location:116 → 528
    YdhJ; HD superfamily phosphohydrolase [General function prediction only]

  2. XM_011366587.2 → XP_011364889.1  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X2

    UniProtKB/TrEMBL
    A0A6P3QXX3
    Conserved Domains (2) summary
    cd09508
    Location:48 → 113
    SAM_HD; SAM domain of HD-phosphohydrolase
    COG1078
    Location:116 → 528
    YdhJ; HD superfamily phosphohydrolase [General function prediction only]
Nucleotide Protein
Heading Accession and Version

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