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FIP1L1 factor interacting with PAPOLA and CPSF1 [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105293777, updated on 11-Apr-2024

Summary

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Gene symbol
FIP1L1
Gene description
factor interacting with PAPOLA and CPSF1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888858.1 (4729069..4801067, complement)

NW_011888858.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene ligand of numb-protein X 1 Neighboring gene sec1 family domain containing 2 Neighboring gene 5S ribosomal RNA Neighboring gene RAS like family 11 member B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888858 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mRNA cleavage and polyadenylation specificity factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pre-mRNA 3'-end-processing factor FIP1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888858.1 Reference Pvam_2.0

    Range
    4729069..4801067 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023532107.1 → XP_023387875.1  pre-mRNA 3'-end-processing factor FIP1 isoform X9

    UniProtKB/TrEMBL
    A0A6P6CLM7
    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  2. XM_023532109.1 → XP_023387877.1  pre-mRNA 3'-end-processing factor FIP1 isoform X12

    UniProtKB/TrEMBL
    A0A6P6CK97
    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  3. XM_023532104.1 → XP_023387872.1  pre-mRNA 3'-end-processing factor FIP1 isoform X6

    UniProtKB/TrEMBL
    A0A6P6CK94
    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  4. XM_023532102.1 → XP_023387870.1  pre-mRNA 3'-end-processing factor FIP1 isoform X2

    UniProtKB/TrEMBL
    A0A6P6CLM2
    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  5. XM_023532106.1 → XP_023387874.1  pre-mRNA 3'-end-processing factor FIP1 isoform X8

    UniProtKB/TrEMBL
    A0A6P6CKP9
    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  6. XM_023532101.1 → XP_023387869.1  pre-mRNA 3'-end-processing factor FIP1 isoform X1

    UniProtKB/TrEMBL
    A0A6P6CKP3
    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  7. XM_023532108.1 → XP_023387876.1  pre-mRNA 3'-end-processing factor FIP1 isoform X11

    UniProtKB/TrEMBL
    A0A6P6CK64
    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  8. XM_023532103.1 → XP_023387871.1  pre-mRNA 3'-end-processing factor FIP1 isoform X5

    UniProtKB/TrEMBL
    A0A6P6CK58
    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  9. XM_011362647.2 → XP_011360949.1  pre-mRNA 3'-end-processing factor FIP1 isoform X3

    UniProtKB/TrEMBL
    A0A6P3QIN0
    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  10. XM_011362645.2 → XP_011360947.1  pre-mRNA 3'-end-processing factor FIP1 isoform X14

    UniProtKB/TrEMBL
    A0A6P3QCX2
    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  11. XM_011362638.2 → XP_011360940.1  pre-mRNA 3'-end-processing factor FIP1 isoform X4

    See identical proteins and their annotated locations for XP_011360940.1

    UniProtKB/TrEMBL
    A0A6P3Q8T8
    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  12. XM_023532110.1 → XP_023387878.1  pre-mRNA 3'-end-processing factor FIP1 isoform X13

    UniProtKB/TrEMBL
    A0A6P6CKK8
    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  13. XM_023532105.1 → XP_023387873.1  pre-mRNA 3'-end-processing factor FIP1 isoform X7

    UniProtKB/TrEMBL
    A0A6P6CKK3
    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  14. XM_011362646.2 → XP_011360948.1  pre-mRNA 3'-end-processing factor FIP1 isoform X15

    See identical proteins and their annotated locations for XP_011360948.1

    UniProtKB/TrEMBL
    A0A6P3QNZ8
    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  15. XM_011362643.2 → XP_011360945.1  pre-mRNA 3'-end-processing factor FIP1 isoform X10

    See identical proteins and their annotated locations for XP_011360945.1

    UniProtKB/TrEMBL
    A0A6P3QAR5
    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif
Nucleotide Protein
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