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radx RPA1 related single stranded DNA binding protein [ Esox lucius (northern pike) ]

Gene ID: 105025033, updated on 18-Jun-2024

Summary

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Gene symbol
radx
Gene description
RPA1 related single stranded DNA binding protein
See related
Ensembl:ENSELUG00000011337
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Also known as
lg07hxorf57; clg07hxorf57
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 7
Exon count:
15
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 7 NC_047575.1 (17518024..17535914)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG07 NC_025974.4 (33503017..33520907, complement)

Chromosome 7 - NC_047575.1Genomic Context describing neighboring genes Neighboring gene vacuolar ATPase assembly factor VMA21 Neighboring gene neuronal PAS domain protein 2 Neighboring gene ring finger protein 128a Neighboring gene TBC1 domain family member 8B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in replication fork IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RPA-related protein RADX
Names
RPA1 related single stranded DNA binding protein, X-linked
linkage group 07 CXorf57 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047575.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    17518024..17535914
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010895417.3 → XP_010893719.2  RPA-related protein RADX isoform X1

    Conserved Domains (1) summary
    pfam17659
    Location:27 → 863
    DUF5521; Family of unknown function (DUF5521)

  2. XM_020048549.2 → XP_019904108.2  RPA-related protein RADX isoform X2

    Related
    ENSELUP00000033142.3, ENSELUT00000001430.3
    Conserved Domains (1) summary
    pfam17659
    Location:15 → 713
    DUF5521; Family of unknown function (DUF5521)
Nucleotide Protein
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