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rimbp2b RIMS binding protein 2b [ Esox lucius (northern pike) ]

Gene ID: 105024829, updated on 13-Mar-2024

Summary

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Gene symbol
rimbp2b
Gene description
RIMS binding protein 2b
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Also known as
rimbp2
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 13
Exon count:
24
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 13 NC_047581.1 (15208004..15319962)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG13 NC_025980.4 (24555596..24667607, complement)

Chromosome 13 - NC_047581.1Genomic Context describing neighboring genes Neighboring gene adhesion G protein-coupled receptor D1 Neighboring gene syntaxin 2b Neighboring gene piwi-like RNA-mediated gene silencing 1 Neighboring gene frizzled class receptor 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome and linkage map of the northern pike (Esox lucius): conserved synteny revealed between the salmonid sister group and the Neoteleostei. Rondeau EB, et al. PLoS One, 2014. PMID 25069045, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neuromuscular synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RIMS-binding protein 2
Names
RIMS binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047581.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    15208004..15319962
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034296399.1 → XP_034152290.1  RIMS-binding protein 2

    UniProtKB/TrEMBL
    A0A3P8YW62
    Conserved Domains (6) summary
    cd12012
    Location:1135 → 1196
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1239 → 1299
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:363 → 423
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    COG1196
    Location:68 → 253
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00063
    Location:662 → 729
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam03154
    Location:751 → 943
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

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