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dync1h1 dynein, cytoplasmic 1, heavy chain 1 [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104968040, updated on 12-Mar-2024

Summary

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Gene symbol
dync1h1
Gene description
dynein, cytoplasmic 1, heavy chain 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
78
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011370902.1 (325963..354119, complement)

NW_011370902.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain 20 Neighboring gene uncharacterized LOC104968039 Neighboring gene transmembrane protein 30B Neighboring gene lysine (K)-specific demethylase 1a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011370902.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables dynein intermediate chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables dynein light intermediate chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables minus-end-directed microtubule motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule-based movement IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of dynein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytoplasmic dynein 1 heavy chain 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011370902.1 Reference NC01 Primary Assembly

    Range
    325963..354119 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010797588.1 → XP_010795890.1  cytoplasmic dynein 1 heavy chain 1

    UniProtKB/TrEMBL
    A0A6I9Q6R4
    Conserved Domains (8) summary
    COG5245
    Location:1032 → 4324
    DYN1; Dynein, heavy chain [Cytoskeleton]
    pfam03028
    Location:3918 → 4627
    Dynein_heavy; Dynein heavy chain and region D6 of dynein motor
    pfam08385
    Location:238 → 830
    DHC_N1; Dynein heavy chain, N-terminal region 1
    pfam08393
    Location:1321 → 1719
    DHC_N2; Dynein heavy chain, N-terminal region 2
    pfam12777
    Location:3197 → 3528
    MT; Microtubule-binding stalk of dynein motor
    pfam12781
    Location:3557 → 3772
    AAA_9; ATP-binding dynein motor region D5
    cl02488
    Location:1157 → 1347
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl21455
    Location:1866 → 2102
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version

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