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ydjc YdjC chitooligosaccharide deacetylase homolog [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104963844, updated on 12-Mar-2024

Summary

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Gene symbol
ydjc
Gene description
YdjC chitooligosaccharide deacetylase homolog
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011334476.1 (704..3084)

NW_011334476.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011334476.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UPF0249 protein ydjC homolog
Names
YdjC homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011334476.1 Reference NC01 Primary Assembly

    Range
    704..3084
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010792498.1 → XP_010790800.1  UPF0249 protein ydjC homolog

    UniProtKB/TrEMBL
    A0A6I9PSU1
    Conserved Domains (1) summary
    cl15692
    Location:1 → 86
    CE4_SF; Catalytic NodB homology domain of the carbohydrate esterase 4 superfamily
Nucleotide Protein
Heading Accession and Version

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