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ykt6 YKT6 v-SNARE homolog (S. cerevisiae) [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104956789, updated on 12-Mar-2024

Summary

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Gene symbol
ykt6
Gene description
YKT6 v-SNARE homolog (S. cerevisiae)
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011359076.1 (87911..92289, complement)

NW_011359076.1Genomic Context describing neighboring genes Neighboring gene rho guanine nucleotide exchange factor 28-like Neighboring gene oncostatin M receptor Neighboring gene glucokinase (hexokinase 4) Neighboring gene myosin, light chain 7, regulatory

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011359076.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptobrevin homolog YKT6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011359076.1 Reference NC01 Primary Assembly

    Range
    87911..92289 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010784330.1 → XP_010782632.1  synaptobrevin homolog YKT6

    UniProtKB/TrEMBL
    A0A6I9P395
    Conserved Domains (3) summary
    COG5143
    Location:3 → 198
    SNC1; Synaptobrevin/VAMP-like protein [Intracellular trafficking and secretion]
    cd15867
    Location:136 → 195
    R-SNARE_YKT6; SNARE motif of YKT6
    pfam13774
    Location:44 → 104
    Longin; Regulated-SNARE-like domain
Nucleotide Protein
Heading Accession and Version

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