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mrc2 mannose receptor, C type 2 [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104949143, updated on 12-Mar-2024

Summary

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Gene symbol
mrc2
Gene description
mannose receptor, C type 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
Orthologs
human zebrafish all
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Genomic context

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See mrc2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
29
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011348482.1 (133153..159760, complement)

NW_011348482.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104949141 Neighboring gene vesicle amine transport 1 Neighboring gene Rho family GTPase 2 Neighboring gene tousled-like kinase 2 Neighboring gene methyltransferase 2A, methylcytidine

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011348482.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type mannose receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011348482.1 Reference NC01 Primary Assembly

    Range
    133153..159760 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010775430.1 → XP_010773732.1  C-type mannose receptor 2 isoform X2

    UniProtKB/TrEMBL
    A0A6I9NAV3
    Conserved Domains (6) summary
    smart00059
    Location:184 → 232
    FN2; Fibronectin type 2 domain
    cd00037
    Location:251 → 365
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    cd03590
    Location:387 → 511
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    smart00034
    Location:525 → 648
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:76 → 137
    RICIN; Ricin-type beta-trefoil
    cd00161
    Location:77 → 140
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

  2. XM_010775429.1 → XP_010773731.1  C-type mannose receptor 2 isoform X1

    UniProtKB/TrEMBL
    A0A6I9NGR3
    Conserved Domains (6) summary
    smart00059
    Location:184 → 232
    FN2; Fibronectin type 2 domain
    cd00037
    Location:251 → 365
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    cd03590
    Location:387 → 511
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    smart00034
    Location:525 → 648
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:76 → 137
    RICIN; Ricin-type beta-trefoil
    cd00161
    Location:77 → 140
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
Nucleotide Protein
Heading Accession and Version

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