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tefm transcription elongation factor, mitochondrial [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104947977, updated on 12-Mar-2024

Summary

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Gene symbol
tefm
Gene description
transcription elongation factor, mitochondrial
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011346291.1 (116444..119607, complement)

NW_011346291.1Genomic Context describing neighboring genes Neighboring gene UTP6 small subunit processome component Neighboring gene SUZ12 polycomb repressive complex 2 subunit b Neighboring gene ATPase family AAA domain containing 5b Neighboring gene ArfGAP with dual PH domains 2 Neighboring gene ras homolog family member T1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011346291.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA polymerase processivity factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation by mitochondrial RNA polymerase IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial nucleoid IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription elongation factor, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011346291.1 Reference NC01 Primary Assembly

    Range
    116444..119607 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010774109.1 → XP_010772411.1  transcription elongation factor, mitochondrial

    UniProtKB/TrEMBL
    A0A6I9NDD8
    Conserved Domains (1) summary
    pfam12836
    Location:92 → 134
    HHH_3; Helix-hairpin-helix motif
Nucleotide Protein
Heading Accession and Version

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