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pde4ba phosphodiesterase 4B, cAMP-specific a [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104925858, updated on 12-Mar-2024

Summary

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Gene symbol
pde4ba
Gene description
phosphodiesterase 4B, cAMP-specific a
Locus tag
EH28_07006
See related
Ensembl:ENSLCRG00005000943
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Also known as
pde4b
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: XVII
Exon count:
20
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) XVII NC_040027.1 (1305116..1465180)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017609024.1 (113244..233498)

Chromosome XVII - NC_040027.1Genomic Context describing neighboring genes Neighboring gene anosmin 1b Neighboring gene sentrin-specific protease 5 Neighboring gene uncharacterized LOC113747962 Neighboring gene SH3GL interacting endocytic adaptor 1a Neighboring gene insulin-like 5a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-AMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane transporter binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cAMP-specific 3',5'-cyclic phosphodiesterase 4B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040027.1 Reference L_crocea_2.0 Primary Assembly

    Range
    1305116..1465180
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027290016.1 → XP_027145817.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X1

    Related
    ENSLCRP00005003598.1, ENSLCRT00005003765.1

  2. XM_019270009.2 → XP_019125554.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X2

    Related
    ENSLCRP00005003610.1, ENSLCRT00005003777.1

  3. XM_010739576.3 → XP_010737878.2  cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X3

    Related
    ENSLCRP00005003623.1, ENSLCRT00005003790.1

  4. XM_010739577.3 → XP_010737879.2  cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X4

    UniProtKB/TrEMBL
    A0A6G0IR01
    Related
    ENSLCRP00005003664.1, ENSLCRT00005003831.1

  5. XM_010739578.3 → XP_010737880.2  cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X5

    UniProtKB/TrEMBL
    A0A6G0IR01
    Related
    ENSLCRP00005003683.1, ENSLCRT00005003851.1
Nucleotide Protein
Heading Accession and Version

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