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Chodl chondrolectin [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104877248, updated on 12-Mar-2024

Summary

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Gene symbol
Chodl
Gene description
chondrolectin
Locus tag
H920_14429
See related
Ensembl:ENSFDAG00000009934
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900936.1 (22976523..23000773, complement)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011046242.1 (1663277..1687516, complement)

NW_022900936.1Genomic Context describing neighboring genes Neighboring gene dynein light chain roadblock-type 1-like Neighboring gene transmembrane serine protease 15 Neighboring gene U2 spliceosomal RNA Neighboring gene ADP-ribosylation factor-like protein 5A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondrolectin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900936.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    22976523..23000773 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010645651.2 → XP_010643953.1  chondrolectin isoform X1

    Conserved Domains (1) summary
    cl02432
    Location:28 → 180
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

  2. XM_010645652.2 → XP_010643954.1  chondrolectin isoform X2

    See identical proteins and their annotated locations for XP_010643954.1

    UniProtKB/TrEMBL
    A0A091CZI0
    Related
    ENSFDAP00000018319.1
    Conserved Domains (1) summary
    cl02432
    Location:28 → 180
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

  3. XM_010645654.2 → XP_010643956.1  chondrolectin isoform X3

    Related
    ENSFDAP00000018323.1
    Conserved Domains (1) summary
    cl02432
    Location:28 → 180
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

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