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Cd3e CD3e molecule [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104865693, updated on 12-Mar-2024

Summary

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Gene symbol
Cd3e
Gene description
CD3e molecule
Locus tag
H920_07515
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900928.1 (66089057..66100690)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011044938.1 (2927821..2939442, complement)

NW_022900928.1Genomic Context describing neighboring genes Neighboring gene poly(A)-specific ribonuclease PNLDC1-like Neighboring gene uncharacterized LOC117286283 Neighboring gene CD3d molecule Neighboring gene CD3g molecule Neighboring gene ubiquitination factor E4A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive thymic T cell selection IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of alpha-beta T cell receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-cell surface glycoprotein CD3 epsilon chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900928.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    66089057..66100690
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010629349.3 → XP_010627651.1  T-cell surface glycoprotein CD3 epsilon chain

    Conserved Domains (2) summary
    smart00077
    Location:174 → 194
    ITAM; Immunoreceptor tyrosine-based activation motif
    pfam16681
    Location:36 → 110
    Ig_5; Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain
Nucleotide Protein
Heading Accession and Version

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