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Ca4 carbonic anhydrase 4 [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104864044, updated on 12-Mar-2024

Summary

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Gene symbol
Ca4
Gene description
carbonic anhydrase 4
Locus tag
H920_06431
See related
Ensembl:ENSFDAG00000016250
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900925.1 (24357642..24365636)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011044819.1 (2669971..2677306, complement)

NW_022900925.1Genomic Context describing neighboring genes Neighboring gene myosin XIX Neighboring gene phosphatidylinositol glycan anchor biosynthesis class W Neighboring gene zinc finger HIT-type containing 3 Neighboring gene uncharacterized LOC104864045 Neighboring gene 40S ribosomal protein S3-like Neighboring gene ubiquitin specific peptidase 32 Neighboring gene syntenin-1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbonate dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbonic anhydrase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900925.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    24357642..24365636
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010626767.3 → XP_010625069.1  carbonic anhydrase 4 isoform X2

    Related
    ENSFDAP00000007838.1
    Conserved Domains (1) summary
    cd03117
    Location:95 → 327
    alpha_CA_IV_XV_like; Carbonic anhydrase alpha, CA_IV, CA_XV, like isozymes. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...

  2. XM_010626766.3 → XP_010625068.1  carbonic anhydrase 4 isoform X1

    Conserved Domains (1) summary
    cd03117
    Location:99 → 331
    alpha_CA_IV_XV_like; Carbonic anhydrase alpha, CA_IV, CA_XV, like isozymes. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
Nucleotide Protein
Heading Accession and Version

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