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Scara3 scavenger receptor class A member 3 [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104861774, updated on 12-Mar-2024

Summary

Gene symbol
Scara3
Gene description
scavenger receptor class A member 3
Locus tag
H920_00479
See related
Ensembl:ENSFDAG00000008776
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
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Genomic context

Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900930.1 (47290935..47329039)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011043248.1 (3126444..3164424, complement)

NW_022900930.1Genomic Context describing neighboring genes Neighboring gene L-gulonolactone oxidase Neighboring gene clusterin Neighboring gene uncharacterized LOC104861760 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

General protein information

Preferred Names
scavenger receptor class A member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900930.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    47290935..47329039
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010623382.2XP_010621684.1  scavenger receptor class A member 3 isoform X2

    See identical proteins and their annotated locations for XP_010621684.1

    Conserved Domains (1) summary
    pfam01391
    Location:484558
    Collagen; Collagen triple helix repeat (20 copies)
  2. XM_010623376.2XP_010621678.1  scavenger receptor class A member 3 isoform X1

    Related
    ENSFDAP00000019975.1
    Conserved Domains (1) summary
    pfam01391
    Location:510584
    Collagen; Collagen triple helix repeat (20 copies)
  3. XM_010623390.3XP_010621692.1  scavenger receptor class A member 3 isoform X2

    See identical proteins and their annotated locations for XP_010621692.1

    Conserved Domains (1) summary
    pfam01391
    Location:484558
    Collagen; Collagen triple helix repeat (20 copies)