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Chrna3 cholinergic receptor nicotinic alpha 3 subunit [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104859002, updated on 12-Mar-2024

Summary

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Gene symbol
Chrna3
Gene description
cholinergic receptor nicotinic alpha 3 subunit
Locus tag
H920_03295
See related
Ensembl:ENSFDAG00000017406
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900937.1 (25945713..25973064)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011044455.1 (58786..86125)

NW_022900937.1Genomic Context describing neighboring genes Neighboring gene ubiquitin conjugating enzyme E2 Q2 Neighboring gene uncharacterized LOC104863471 Neighboring gene cholinergic receptor nicotinic beta 4 subunit Neighboring gene cholinergic receptor nicotinic alpha 5 subunit Neighboring gene proteasome 20S subunit alpha 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine-gated monoatomic cation-selective channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neuronal acetylcholine receptor subunit alpha-3
Names
Neuronal acetylcholine receptor subunit alpha-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900937.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    25945713..25973064
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010619494.2 → XP_010617796.2  neuronal acetylcholine receptor subunit alpha-3

    Conserved Domains (2) summary
    TIGR00860
    Location:1 → 429
    LIC; Cation transporter family protein
    cl28912
    Location:1 → 174
    LGIC_ECD; extracellular domain (ECD) of Cys-loop neurotransmitter-gated ion channels (also known as ligand-gated ion channel (LGIC))
Nucleotide Protein
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