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Rnf169 ring finger protein 169 [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104847728, updated on 12-Mar-2024

Summary

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Gene symbol
Rnf169
Gene description
ring finger protein 169
Locus tag
H920_14633
See related
Ensembl:ENSFDAG00000018050
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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See Rnf169 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900928.1 (28067546..28142371)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011046281.1 (3429469..3503746)

NW_022900928.1Genomic Context describing neighboring genes Neighboring gene DNA polymerase delta 3, accessory subunit Neighboring gene chordin like 2 Neighboring gene X-ray radiation resistance associated 1 Neighboring gene signal peptidase complex subunit 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in site of double-strand break IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RNF169

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900928.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    28067546..28142371
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010603290.2 → XP_010601592.1  E3 ubiquitin-protein ligase RNF169

    UniProtKB/TrEMBL
    A0A091CWE6
    Related
    ENSFDAP00000010239.1
Nucleotide Protein
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