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TNRC6A trinucleotide repeat containing adaptor 6A [ Haliaeetus leucocephalus (bald eagle) ]

Gene ID: 104833663, updated on 3-Aug-2024

Summary

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Gene symbol
TNRC6A
Gene description
trinucleotide repeat containing adaptor 6A
Gene type
protein coding
RefSeq status
MODEL
Organism
Haliaeetus leucocephalus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Haliaeetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current Haliaeetus_leucocephalus-4.0 (GCF_000737465.1) Unplaced Scaffold NW_010972731.1 (9718982..9759343)

NW_010972731.1Genomic Context describing neighboring genes Neighboring gene calcium voltage-gated channel auxiliary subunit gamma 3 Neighboring gene RB binding protein 6, ubiquitin ligase Neighboring gene interphotoreceptor matrix proteoglycan 2-like Neighboring gene partner and localizer of BRCA2 Neighboring gene dynactin subunit 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010972731.1 Unplaced Scaffold Reference Haliaeetus_leucocephalus-4.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in miRNA-mediated post-transcriptional gene silencing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of nuclear-transcribed mRNA poly(A) tail shortening IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trinucleotide repeat-containing gene 6A protein
Names
trinucleotide repeat containing 6A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haliaeetus leucocephalus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Haliaeetus_leucocephalus-4.0

Genomic

  1. NW_010972731.1 Reference Haliaeetus_leucocephalus-4.0

    Range
    9718982..9759343
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010570502.1 → XP_010568804.1  trinucleotide repeat-containing gene 6A protein

    See identical proteins and their annotated locations for XP_010568804.1

    Conserved Domains (3) summary
    cd12711
    Location:1536 → 1618
    RRM_TNRC6A; RNA recognition motif in vertebrate GW182 autoantigen
    pfam10427
    Location:885 → 1005
    Ago_hook; Argonaute hook
    pfam16608
    Location:1260 → 1535
    TNRC6-PABC_bdg; TNRC6-PABC binding domain
Nucleotide Protein
Heading Accession and Version

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