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TSPAN12 tetraspanin 12 [ Corvus cornix cornix ]

Gene ID: 104686806, updated on 3-Aug-2024

Summary

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Gene symbol
TSPAN12
Gene description
tetraspanin 12
See related
EnsemblRapid:ENSCCCG00025014578
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1A
Exon count:
8
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 1A NC_047057.1 (22449914..22506667)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959342.1 (899792..933345, complement)

Chromosome 1A - NC_047057.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104686807 Neighboring gene inhibitor of growth family member 3 Neighboring gene uncharacterized LOC120411877 Neighboring gene potassium voltage-gated channel subfamily D member 2 Neighboring gene uncharacterized LOC109144100

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetraspanin-12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_047057.1 Reference ASM73873v5 Primary Assembly

    Range
    22449914..22506667
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039570534.1 → XP_039426468.1  tetraspanin-12

    Related
    ENSCCCP00025025274.1, ENSCCCT00025030169.1
    Conserved Domains (2) summary
    cd03157
    Location:116 → 218
    TM4SF12_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF12_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
    pfam00335
    Location:10 → 244
    Tetraspannin; Tetraspanin family

  2. XM_039570535.1 → XP_039426469.1  tetraspanin-12

    Conserved Domains (2) summary
    cd03157
    Location:116 → 218
    TM4SF12_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF12_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
    pfam00335
    Location:10 → 244
    Tetraspannin; Tetraspanin family
Nucleotide Protein
Heading Accession and Version

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